CFinderADM001257's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| transferase activity, transferring acyl groups | 0.001199991 | GO:0016746 |
| protein serine/threonine phosphatase activity | 0.001199991 | GO:0004722 |
| protein dephosphorylation | 0.00133113 | GO:0006470 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004675 | AT4G37210 (6.00E-33) | Tetratricopeptide repeat (TPR)-like superfamily protein |
| CRO_T014128 | - | - |
| CRO_T015039 | - | - |
| CRO_T019485 | AT5G10740 (1.00E-33) | Protein phosphatase 2C family protein |
| CRO_T033013 | AT2G37678 (2.00E-10) | FHY1|far-red elongated hypocotyl 1; PAT3|PHYTOCHROME A SIGNAL TRANSDUCTION 3 |
| CRO_T033330 | AT5G60370 (8.00E-90) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000521 | UDP-D-galacturonate biosynthesis II (from D-galacturonate) nucleotide binding Protein_kinases_phosphatases, PPC:1.5.3: Receptor Like Cytoplasmic Kinase IV response to red light Cul3-RING ubiquitin ligase complex xylogalacturonan biosynthesis Cytochrome_P450, Cytochrome P450: CYP72A phosphotransferase activity, alcohol group as acceptor MAPK signaling pathway secologanin and strictosidine biosynthesis NF-kappa B signaling pathway Ubiquitin_Proteasome_system, E3 adaptor: BTB Amino sugar and nucleotide sugar metabolism transferase activity, transferring acyl groups Spliceosome | details |
| CFinderADM000530 | AMPK signaling pathway intracellular ribonucleoprotein complex viral nucleocapsid RNA processing transferase activity, transferring acyl groups Spliceosome Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM001438 | DNA topological change DNA topoisomerase type I activity DNA topoisomerase type II (ATP-hydrolyzing) activity chromosome formation of glycosidic bonds, GlycosylTransferases: GTnc DNA binding | details |
| CFinderADM001923 | tryptophanyl-tRNA aminoacylation tryptophan-tRNA ligase activity Aminoacyl-tRNA biosynthesis transferase activity cytosol | details |
Expression profiles
 Show details about module gene expression profiling |