CFinderADM001296's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| S-adenosylmethionine biosynthetic process | 2.42E-05 | GO:0006556 |
| S-adenosyl-L-methionine cycle II | 2.68E-05 | plantCyc |
| 2'-deoxymugineic acid phytosiderophore biosynthesis | 2.68E-05 | plantCyc |
| L-methionine degradation I (to L-homocysteine) | 2.68E-05 | plantCyc |
| L-methionine salvage cycle I (bacteria and plants) | 2.68E-05 | plantCyc |
| L-methionine salvage cycle II (plants) | 2.68E-05 | plantCyc |
| S-adenosyl-L-methionine biosynthesis | 2.68E-05 | plantCyc |
| methionine adenosyltransferase activity | 4.83E-05 | GO:0004478 |
| one-carbon metabolic process | 6.92E-05 | GO:0006730 |
| Transcription_related, Transcription factor: G2-like | 8.88E-05 | TF family |
| ethylene biosynthesis I (plants) | 0.000117702 | plantCyc |
| cell wall organization or biogenesis | 0.000283728 | GO:0071554 |
| O-acetyltransferase activity | 0.0007624 | GO:0016413 |
| Biosynthesis of amino acids | 0.001037518 | KEGG pathway |
| Golgi apparatus | 0.016352379 | GO:0005794 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T005467 | AT1G20900 (5.00E-36) | AHL27|AT-hook motif nuclear-localized protein 27; ESC|ESCAROLA; ORE7|ORESARA 7 |
| CRO_T009521 | AT5G41810 (3.00E-26) | unknown protein |
| CRO_T010478 | AT1G32240 (5.00E-20) | KAN2|KANADI 2 |
| CRO_T014413 | AT5G20590 (2.00E-68) | TBL5|TRICHOME BIREFRINGENCE-LIKE 5 |
| CRO_T033465 | AT2G36880 (0) | MAT3|methionine adenosyltransferase 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000958 | violaxanthin de-epoxidase activity L-ascorbic acid transporter activity zeaxanthin, antheraxanthin and violaxanthin interconversion xanthophyll cycle L-ascorbic acid transport protein-disulfide reductase activity pollen tube guidance regulation of pollen tube growth cellular lipid metabolic process inorganic phosphate transmembrane transporter activity anion transmembrane transport pollen tube growth Carotenoid biosynthesis chloroplast inner membrane cell redox homeostasis oxidation-reduction process chloroplast thylakoid membrane DNA binding cytosol | details |
| CFinderADM002211 | serine-type endopeptidase inhibitor activity negative regulation of endopeptidase activity Indole alkaloid biosynthesis megagametogenesis response to wounding ajmaline and sarpagine biosynthesis heat shock protein binding Transcription_related, Transcription factor: G2-like Transcription_related, Transcription factor: WRKY multicellular organism development Plant-pathogen interaction unfolded protein binding chloroplast thylakoid membrane sequence-specific DNA binding transcription factor activity, sequence-specific DNA binding hydrolase activity | details |
Expression profiles
 Show details about module gene expression profiling |