CFinderADM001390's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protein dephosphorylation | 0.00091081 | GO:0006470 |
| phosphoprotein phosphatase activity | 0.001187588 | GO:0004721 |
| nucleic acid binding | 0.0315652 | GO:0003676 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004947 | AT3G29760 (2.00E-43) | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
| CRO_T013259 | - | - |
| CRO_T013336 | AT1G63980 (3.00E-79) | D111/G-patch domain-containing protein |
| CRO_T016678 | AT5G21070 (7.00E-72) | unknown protein |
| CRO_T024357 | AT1G16840 (1.00E-19) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM001743 | Aminoacyl-tRNA biosynthesis mitochondrial alanyl-tRNA aminoacylation tRNA aminoacylation for protein translation SRP-dependent cotranslational protein targeting to membrane alanine-tRNA ligase activity aminoacyl-tRNA ligase activity 7S RNA binding tRNA binding tRNA modification signal recognition particle, endoplasmic reticulum targeting Protein export amino acid binding GTPase activity GTP binding catalytic activity vacuolar membrane endoplasmic reticulum Golgi apparatus | details |
| CFinderADM001825 | metallocarboxypeptidase activity Transcription_related, Transcription regulator: IWS1 clathrin adaptor complex extracellular space Endocytosis biosynthetic process vesicle-mediated transport intracellular protein transport pyridoxal phosphate binding catalytic activity proteolysis integral component of membrane | details |
| CFinderADM001987 | dihydroorotate dehydrogenase activity transferase activity, transferring pentosyl groups pyrimidine ribonucleotide biosynthetic process folic acid-containing compound biosynthetic process 'de novo' pyrimidine nucleobase biosynthetic process UMP biosynthesis I L-histidine biosynthesis L-glutamine degradation I tetrahydrofolate biosynthesis II Folate biosynthesis cellular amino acid biosynthetic process Pyrimidine metabolism amino acid binding ligase activity Biosynthesis of amino acids metabolic process chloroplast thylakoid membrane chloroplast stroma | details |
| CFinderADM002016 | protein polyubiquitination protein ubiquitination involved in ubiquitin-dependent protein catabolic process ubiquitin protein ligase activity hormone-mediated signaling pathway negative regulation of photomorphogenesis short-day photoperiodism, flowering cotyledon development Ubiquitin_Proteasome_system, E3 adaptor: Cullin sugar mediated signaling pathway Cul4-RING E3 ubiquitin ligase complex COPI vesicle coat photomorphogenesis structural molecule activity retrograde vesicle-mediated transport, Golgi to ER intra-Golgi vesicle-mediated transport flower development ubiquitin protein ligase binding ER to Golgi vesicle-mediated transport Ubiquitin mediated proteolysis proteasome-mediated ubiquitin-dependent protein catabolic process DNA repair Golgi membrane intracellular protein transport Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| CFinderADM002039 | transferase activity, transferring pentosyl groups phenylalanyl-tRNA aminoacylation Transcription_related, Transcription factor: NF-YB phenylalanine-tRNA ligase complex RNA binding phenylalanine-tRNA ligase activity L-glutamine degradation I L-histidine biosynthesis fatty-acyl-CoA binding cellular amino acid biosynthetic process Aminoacyl-tRNA biosynthesis Biosynthesis of amino acids protein heterodimerization activity ATP-dependent RNA helicase activity magnesium ion binding nucleus ATP binding | details |
| CFinderADM002276 | transferase activity, transferring pentosyl groups folic acid-containing compound biosynthetic process L-glutamine degradation I L-histidine biosynthesis Folate biosynthesis tetrahydrofolate biosynthesis II cellular amino acid biosynthetic process Biosynthesis of amino acids ATP-dependent RNA helicase activity ligase activity RNA binding | details |
Expression profiles
 Show details about module gene expression profiling |