CFinderADM001410's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| NatC complex | 1.29E-05 | GO:0031417 |
| Protein_kinases_phosphatases, PPC:4.1.3: MAP2K | 3.76E-05 | kinase family |
| MAP kinase kinase activity | 8.66E-05 | GO:0004708 |
| alternative oxidase activity | 8.66E-05 | GO:0009916 |
| RNA polymerase II transcription factor binding | 0.000253629 | GO:0001085 |
| RNA polymerase II regulatory region sequence-specific DNA binding | 0.000281239 | GO:0000977 |
| receptor signaling protein serine/threonine kinase activity | 0.000281239 | GO:0004702 |
| transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 0.000281239 | GO:0001228 |
| peptide alpha-N-acetyltransferase activity | 0.000281239 | GO:0004596 |
| aerobic respiration III (alternative oxidase pathway) | 0.000281383 | plantCyc |
| transcription factor complex | 0.000291017 | GO:0005667 |
| Transcription_related, Transcription factor: C2C2-GATA | 0.000291785 | TF family |
| Transcription_related, Transcription regulator: GNAT | 0.000291785 | TF family |
| N-terminal protein amino acid acetylation | 0.000353166 | GO:0006474 |
| cell differentiation | 0.000353166 | GO:0030154 |
| MAPK cascade | 0.000744343 | GO:0000165 |
| positive regulation of transcription, DNA-templated | 0.000756022 | GO:0045893 |
| chromatin binding | 0.00117495 | GO:0003682 |
| respiratory chain | 0.001222228 | GO:0070469 |
| MAPK signaling pathway - plant | 0.002066244 | KEGG pathway |
| Transcription_related, Transcription factor: MYB | 0.002576653 | TF family |
| protein binding | 0.002971567 | GO:0005515 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003734 | AT1G06180 (2.00E-25) | ATMYB13|myb domain protein 13 |
| CRO_T018064 | AT5G59790 (8.00E-95) | Domain of unknown function (DUF966) |
| CRO_T020175 | AT3G21220 (4.00E-127) | ATMEK5|MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5; MEK5|MAP KINASE KINASE 5 |
| CRO_T022901 | AT1G32350 (2.00E-34) | AOX1D|alternative oxidase 1D |
| CRO_T030681 | AT2G38130 (4.00E-19) | ATMAK3|Acyl-CoA N-acyltransferases (NAT) superfamily protein |
| CRO_T030690 | AT5G66320 (2.00E-46) | GATA5|GATA transcription factor 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000635 | hesperitin glycoside biosynthesis naringenin glycoside biosynthesis negative regulation of cell size inflorescence morphogenesis leaf morphogenesis protein glycosylation galactosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: WRKY Transcription_related, Transcription factor: NAC flavonoid glucuronidation flavonoid biosynthetic process quercetin 3-O-glucosyltransferase activity quercetin 7-O-glucosyltransferase activity ATPase activity, coupled to transmembrane movement of substances Golgi membrane integral component of membrane intracellular membrane-bounded organelle transmembrane transport transcription, DNA-templated Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM000696 | NatC complex cytidylate kinase activity uridylate kinase activity nitrate transmembrane transporter activity CMP phosphorylation pyrimidine deoxyribonucleotide phosphorylation UTP and CTP de novo biosynthesis pyrimidine nucleotide biosynthetic process nitrate transport 'de novo' pyrimidine nucleobase biosynthetic process nucleotide phosphorylation regulation of flower development peptide alpha-N-acetyltransferase activity Nitrogen metabolism N-terminal protein amino acid acetylation Pyrimidine metabolism Transcription_related, Transcription regulator: GNAT cellular transition metal ion homeostasis pyrimidine ribonucleotides interconversion metal ion transport transition metal ion binding Transcription_related, Transcription factor: MYB apoplast transmembrane transport DNA binding | details |
| CFinderADM000739 | tRNA export from nucleus Protein_kinases_phosphatases, PPC:4.1.3: MAP2K CURI complex UTP-C complex MAP kinase kinase activity receptor signaling protein serine/threonine kinase activity rRNA processing MAPK cascade small-subunit processome helicase activity protein binding MAPK signaling pathway - plant Ribosome biogenesis in eukaryotes ATP binding nucleic acid binding | details |
| CFinderADM001034 | alternative oxidase activity aerobic respiration III (alternative oxidase pathway) respiratory chain response to stress calmodulin binding formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM001534 | alternative oxidase activity Transcription_related, Transcription regulator: TRAF aerobic respiration III (alternative oxidase pathway) respiratory chain integral component of membrane metal ion binding Ubiquitin_Proteasome_system, E3 adaptor: BTB protein serine/threonine phosphatase activity Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII ATP binding protein dephosphorylation protein kinase activity | details |
| CFinderADM002028 | Protein_kinases_phosphatases, PPC:4.1.3: MAP2K MAP kinase kinase activity receptor signaling protein serine/threonine kinase activity cell division MAPK cascade microtubule MAPK signaling pathway - plant embryo development ending in seed dormancy protein binding methyltransferase activity ubiquitin-protein transferase activity protein ubiquitination methylation | details |
| CFinderADM002214 | NatC complex mRNA cap binding complex mRNA (guanine-N7-)-methyltransferase activity 7-methylguanosine mRNA capping RNA (guanine-N7)-methylation lipid transport Transcription_related, Transcription regulator: GNAT N-terminal protein amino acid acetylation peptide alpha-N-acetyltransferase activity lipid binding mRNA surveillance pathway integral component of membrane | details |
Expression profiles
 Show details about module gene expression profiling |