CFinderADM001473's detailed annotation
Protein:
Yellow color--query protein
Green color--interaction proteins.
Interaction line:
Pink--proteins own interaction and positive co-expression relationship with target protein
Blue--proteins own interaction and negative co-expression relationship with target protein
Orange--proteins own interaction and protein-protein relationship with target protein
This network produced by cytoscapeweb

Module annotation (GSEA enrichment result)

Function AnnotationFDRGene Ontolog
cytoplasmic mRNA processing body assembly1.38E-05GO:0033962
deadenylation-dependent decapping of nuclear-transcribed mRNA2.42E-05GO:0000290
mannose metabolic process2.76E-05GO:0006013
Other glycan degradation 5.10E-05KEGG pathway
alpha-mannosidase activity6.15E-05GO:0004559
COPII vesicle coat0.000179257GO:0030127
cytoplasmic mRNA processing body0.000265062GO:0000932
zinc ion binding0.000294649GO:0008270
ER to Golgi vesicle-mediated transport0.00044624GO:0006888
RNA degradation 0.000898409KEGG pathway
carbohydrate binding0.002151293GO:0030246
intracellular protein transport0.002556959GO:0006886
vacuole0.003236116GO:0005773
RNA binding0.012599724GO:0003723

Module member annotation

Gene IDOrtholog in Arabidopsis (Blast E-value)Annotation in Arabidopsis
CRO_T002553AT1G79090 (0)unknown protein
CRO_T006036AT4G01810 (0)Sec23/Sec24 protein transport family protein
CRO_T014643AT3G26720 (0)Glycosyl hydrolase family 38 protein
CRO_T015424AT5G61960 (6.00E-163)AML1|MEI2-like protein 1
CRO_T024653AT4G39420 (9.00E-176)unknown protein

Direct connection functional modules

Module IDFunction AnnotationOverlap condition
CFinderADM000002Transcription_related, Transcription factor: M-type
phosphatidylethanolamine binding
L-alanine biosynthesis III
nickel cation binding
photoperiodism, flowering
molybdenum cofactor biosynthesis
transferase activity, transferring alkyl or aryl (other than methyl) groups
regulation of flower development
nitrogen compound metabolic process
Circadian rhythm - plant
Transcription_related, Transcription factor: G2-like
transferase activity, transferring hexosyl groups
Transcription_related, Transcription factor: MYB-related
DNA-directed RNA polymerase activity
Terpenoid backbone biosynthesis
Transcription_related, Transcription factor: B3
multicellular organism development
Transcription_related, Transcription factor: NAC
binding
Transcription_related, Transcription factor: FAR1
transcription, DNA-templated
GTPase activity
Purine metabolism
details
CFinderADM001472argininosuccinate metabolic process
cytoplasmic mRNA processing body assembly
argininosuccinate synthase activity
deadenylation-dependent decapping of nuclear-transcribed mRNA
urea cycle
Transcription_related, Transcription factor: EIL
Protein_kinases_phosphatases, PPC:4.1.5.1: WNK like kinase - with no lysine kinase
arginine biosynthetic process
cytoplasmic mRNA processing body
Biosynthesis of amino acids
MAPK signaling pathway - plant
RNA degradation
Ubiquitin_Proteasome_system, E3 adaptor: DWD
RNA binding
transcription factor activity, sequence-specific DNA binding
regulation of transcription, DNA-templated
details
CFinderADM001655cytoplasmic mRNA processing body assembly
pyrimidine ribonucleosides salvage I
deadenylation-dependent decapping of nuclear-transcribed mRNA
vacuolar transport
cytoplasmic mRNA processing body
response to abscisic acid
Endocytosis
RNA degradation
phosphorylation
kinase activity
intracellular
RNA binding
details
CFinderADM001720MicroRNAs in cancer
Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase
L-amino acid transmembrane transporter activity
amino acid transmembrane transport
Transcription_related, Transcription factor: C2H2
antiporter activity
integral component of plasma membrane
calcium ion binding
kinase activity
phosphorylation
nucleotide binding
details
CFinderADM001836MicroRNAs in cancer
L-amino acid transmembrane transporter activity
antiporter activity
Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase
integral component of plasma membrane
L-amino acid transport
long-day photoperiodism
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
L-alpha-amino acid transmembrane transport
sugar mediated signaling pathway
COPII vesicle coat
response to wounding
cytoplasmic mRNA processing body
salicylic acid mediated signaling pathway
jasmonic acid mediated signaling pathway
cytosol
zinc ion binding
ER to Golgi vesicle-mediated transport
amino acid transmembrane transport
defense response to bacterium
helicase activity
RNA transport
intracellular protein transport
kinase activity
plasmodesma
phosphorylation
details

Expression profiles


Show details about module gene expression profiling
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