CFinderADM001475's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Legionellosis | 4.95E-06 | KEGG pathway |
| ER to Golgi vesicle-mediated transport | 0.000507846 | GO:0006888 |
| small GTPase mediated signal transduction | 0.000738319 | GO:0007264 |
| Golgi membrane | 0.003519549 | GO:0000139 |
| Ubiquitin_Proteasome_system, E3 adaptor: F-box | 0.005102114 | ubs family |
| endoplasmic reticulum membrane | 0.005889727 | GO:0005789 |
| chloroplast envelope | 0.008155865 | GO:0009941 |
| GTP binding | 0.025033702 | GO:0005525 |
| hydrolase activity | 0.045095266 | GO:0016787 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000853 | AT1G02130 (2.00E-108) | ARA-5|RAS 5; ARA5|ARABIDOPSIS RAS 5; ATRAB1B|RESPONSIVE TO ABSCISIC ACID 1B; ATRABD2A|RAB D2A |
| CRO_T001428 | AT1G12440 (5.00E-46) | A20/AN1-like zinc finger family protein |
| CRO_T012043 | - | - |
| CRO_T014525 | AT1G17620 (7.00E-44) | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| CRO_T029135 | AT5G65250 (2.00E-09) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001045 | formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| CFinderADM002122 | trichome branching Plant-pathogen interaction magnesium ion binding protein binding GTPase activity GTP binding calcium ion binding integral component of membrane | details |
| CFinderADM002149 | embryo development ending in seed dormancy mitochondrion Longevity regulating pathway - worm rRNA transcription from plastid promoter chloroplast envelope mitochondrial inner membrane presequence translocase complex viral envelope integral component of mitochondrial inner membrane protein import into mitochondrial matrix RNA splicing protein channel activity metallopeptidase activity Transcription_related, Transcription regulator: mTERF ATP-dependent peptidase activity double-stranded DNA binding plastid proteolysis regulation of transcription, DNA-templated | details |
Expression profiles
 Show details about module gene expression profiling |