CFinderADM001504's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Circadian rhythm - plant | 6.49E-05 | KEGG pathway |
| red or far-red light signaling pathway | 6.58E-05 | GO:0010017 |
| Circadian rhythm | 6.58E-05 | KEGG pathway |
| negative regulation of transcription, DNA-templated | 0.000204273 | GO:0045892 |
| phosphorelay signal transduction system | 0.000484653 | GO:0000160 |
| Transcription_related, Transcription factor: Orphans | 0.000593794 | TF family |
| Transcription_related, Transcription regulator: PHD | 0.000593794 | TF family |
| oxidoreductase activity, acting on CH-OH group of donors | 0.001784958 | GO:0016614 |
| Protein_kinases_phosphatases, PPC:1.12.4: Leucine Rich Repeat Kinase XI & XII | 0.001803065 | kinase family |
| flavin adenine dinucleotide binding | 0.005279754 | GO:0050660 |
| protein kinase activity | 0.021198021 | GO:0004672 |
| protein phosphorylation | 0.038230409 | GO:0006468 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T016742 | AT3G55470 (2.00E-19) | Calcium-dependent lipid-binding (CaLB domain) family protein |
| CRO_T020362 | AT5G61570 (5.00E-25) | Protein kinase superfamily protein |
| CRO_T024639 | - | - |
| CRO_T027138 | AT3G02890 (2.00E-22) | RING/FYVE/PHD zinc finger superfamily protein |
| CRO_T032602 | AT3G16857 (1.00E-18) | ARR1|response regulator 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000638 | pyruvate fermentation to lactate 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity L-lactate dehydrogenase activity ATPase activator activity regulation of pentose-phosphate shunt positive regulation of ATPase activity cation-transporting ATPase activity carboxylic acid metabolic process cellular component organization gluconeogenesis cellular protein modification process cation transmembrane transport chaperone binding glycolysis I (from glucose 6-phosphate) glycolytic process Glycolysis / Gluconeogenesis Transcription_related, Transcription regulator: PHD Protein export protein transport ligase activity | details |
Expression profiles
 Show details about module gene expression profiling |