CFinderADM001511's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| cytoskeleton-dependent intracellular transport | 4.14E-05 | GO:0030705 |
| regulation of microtubule-based process | 4.14E-05 | GO:0032886 |
| protein localization | 4.14E-05 | GO:0008104 |
| Transcription_related, Transcription factor: SBP | 5.70E-05 | TF family |
| ATP-dependent microtubule motor activity, plus-end-directed | 0.000189628 | GO:0008574 |
| root development | 0.001031189 | GO:0048364 |
| translational initiation | 0.001292404 | GO:0006413 |
| microtubule-based movement | 0.001292404 | GO:0007018 |
| kinesin complex | 0.002282149 | GO:0005871 |
| microtubule binding | 0.002818105 | GO:0008017 |
| microtubule | 0.003016145 | GO:0005874 |
| translation initiation factor activity | 0.003484412 | GO:0003743 |
| plasmodesma | 0.02361621 | GO:0009506 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T017098 | AT2G42200 (3.00E-39) | SPL9|squamosa promoter binding protein-like 9 |
| CRO_T020019 | - | - |
| CRO_T021278 | AT5G07740 (1.00E-57) | actin binding |
| CRO_T024706 | AT1G01950 (1.00E-117) | ARK2|armadillo repeat kinesin 2; AtKINUb|KINESIN Ungrouped clade, gene B |
| CRO_T027231 | - | - |
| CRO_T028935 | AT5G18404 (1.00E-08) | unknown protein |
| CRO_T033231 | AT5G06970 (6.00E-75) | Protein of unknown function (DUF810) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000815 | N6-threonylcarbomyladenosine methylthiotransferase activity tRNA methylthiolation Protein_kinases_phosphatases, PPC:3.1.1: Casein Kinase I Family MAPK signaling pathway - yeast Wnt signaling pathway regulation of cell shape Endocytosis ribosome biogenesis SNARE interactions in vesicular transport peptidyl-serine phosphorylation translational initiation Ribosome biogenesis in eukaryotes 4 iron, 4 sulfur cluster binding translation initiation factor activity GTPase activity Ubiquitin_Proteasome_system, E3 adaptor: DWD GTP binding nucleolus endoplasmic reticulum | details |
| CFinderADM000950 | pyridoxamine-phosphate oxidase activity protein targeting to Golgi Golgi vesicle prefusion complex stabilization Golgi to plasma membrane transport exocyst assembly pyridoxal phosphate biosynthetic process Transcription_related, Transcription factor: SBP synaptonemal complex retrograde transport, vesicle recycling within Golgi reciprocal meiotic recombination Golgi transport complex Ras signaling pathway Golgi organization exocyst retrograde vesicle-mediated transport, Golgi to ER FMN binding | details |
| CFinderADM000951 | phosphoribosyl-AMP cyclohydrolase activity phosphoribosyl-ATP diphosphatase activity pyridoxamine-phosphate oxidase activity L-histidine biosynthesis protein targeting to Golgi synaptonemal complex pyridoxal phosphate biosynthetic process histidine biosynthetic process reciprocal meiotic recombination Transcription_related, Transcription factor: SBP FMN binding Biosynthesis of amino acids proteasome-mediated ubiquitin-dependent protein catabolic process ubiquitin protein ligase activity protein ubiquitination Ubiquitin_Proteasome_system, E3: RING chloroplast stroma | details |
| CFinderADM001125 | developmental vegetative growth Protein_kinases_phosphatases, PPC:3.1.1: Casein Kinase I Family purine deoxyribonucleosides salvage adenylate kinase activity Wnt signaling pathway nucleotide phosphorylation regulation of cell shape adenosine ribonucleotides de novo biosynthesis MAPK signaling pathway - yeast Endocytosis translational initiation peptidyl-serine phosphorylation cellular process mRNA surveillance pathway Ubiquitin mediated proteolysis ATPase activity translation initiation factor activity Ubiquitin_Proteasome_system, E3 adaptor: F-box Purine metabolism nucleus ATP binding | details |
| CFinderADM001359 | ribonucleoside binding DNA-directed RNA polymerase activity intracellular protein transport Protein processing in endoplasmic reticulum vacuolar membrane transcription, DNA-templated plasmodesma endoplasmic reticulum DNA binding integral component of membrane | details |
| CFinderADM001753 | plant-type vacuole membrane response to salt stress signal transduction transporter activity transport | details |
| CFinderADM002031 | serine-type endopeptidase activity transporter activity transport proteolysis protein kinase activity mitochondrion nucleotide binding | details |
Expression profiles
 Show details about module gene expression profiling |