CFinderADM001540's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 9.82E-06 | cazy family |
| fatty acid binding | 1.15E-05 | GO:0005504 |
| galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity | 1.15E-05 | GO:0015018 |
| intramolecular lyase activity | 2.15E-05 | GO:0016872 |
| system development | 2.42E-05 | GO:0048731 |
| fatty acid metabolic process | 5.25E-05 | GO:0006631 |
| xylan biosynthesis | 0.00012107 | plantCyc |
| Flavonoid biosynthesis | 0.000313878 | KEGG pathway |
| flavonoid biosynthesis (in equisetum) | 0.000313878 | plantCyc |
| translational initiation | 0.000506684 | GO:0006413 |
| Transcription_related, Transcription factor: C2H2 | 0.000996848 | TF family |
| translation initiation factor activity | 0.001751842 | GO:0003743 |
| Golgi apparatus | 0.01648008 | GO:0005794 |
| chloroplast envelope | 0.01648008 | GO:0009941 |
| chloroplast stroma | 0.025943751 | GO:0009570 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004357 | AT3G63170 (8.00E-69) | FAP1|fatty-acid-binding protein 1 |
| CRO_T010617 | AT4G36890 (2.00E-161) | IRX14|irregular xylem 14 |
| CRO_T023121 | AT1G73180 (8.00E-47) | Eukaryotic translation initiation factor eIF2A family protein |
| CRO_T023898 | AT1G17130 (2.00E-82) | Family of unknown function (DUF572) |
| CRO_T033589 | AT5G14140 (6.00E-84) | zinc ion binding; nucleic acid binding; zinc ion binding |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000808 | formation of glycosidic bonds, GlycosylTransferases: GTnc galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity system development exon-exon junction complex xylan biosynthesis translational initiation translation initiation factor activity Golgi apparatus hydrolase activity | details |
| CFinderADM001269 | conjugation formation of glycosidic bonds, GlycosylTransferases: GTnc galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity system development xylan biosynthesis MAP kinase activity mitotic nuclear division Protein_kinases_phosphatases, PPC:4.5.1: MAPK Family MAPK cascade Peroxisome cell division MAPK signaling pathway - plant Golgi apparatus chloroplast envelope intracellular | details |
| CFinderADM002040 | RNA lariat debranching enzyme activity exocyst mRNA splicing, via spliceosome translational initiation exocytosis RNA phosphodiester bond hydrolysis, endonucleolytic embryo development ending in seed dormancy translation initiation factor activity ubiquitin-protein transferase activity protein ubiquitination hydrolase activity | details |
| CFinderADM002108 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity peptidyl-diphthamide biosynthetic process from peptidyl-histidine system development formation of glycosidic bonds, GlycosylTransferases: GTnc xylan biosynthesis Ubiquitin_Proteasome_system, E3 adaptor: DWD Golgi apparatus | details |
Expression profiles
 Show details about module gene expression profiling |