CFinderADM001568's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 3.92E-06 | ubs family |
| peptidyl-arginine methylation | 1.71E-05 | GO:0018216 |
| histone-arginine N-methyltransferase activity | 5.17E-05 | GO:0008469 |
| protein-arginine omega-N asymmetric methyltransferase activity | 5.17E-05 | GO:0035242 |
| snoRNA binding | 0.00014539 | GO:0030515 |
| Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase | 0.000145677 | kinase family |
| NF-kappa B signaling pathway | 0.000253097 | KEGG pathway |
| rRNA processing | 0.000731091 | GO:0006364 |
| small-subunit processome | 0.002897908 | GO:0032040 |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.008988693 | cazy family |
| protein serine/threonine kinase activity | 0.025491143 | GO:0004674 |
| protein phosphorylation | 0.033994588 | GO:0006468 |
| regulation of transcription, DNA-templated | 0.033994588 | GO:0006355 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007365 | AT3G12270 (7.00E-172) | ATPRMT3|PROTEIN ARGININE METHYLTRANSFERASE 3 |
| CRO_T013586 | AT1G48630 (3.00E-16) | RACK1B|receptor for activated C kinase 1B |
| CRO_T024646 | AT5G08390 (2.00E-11) | Transducin/WD40 repeat-like superfamily protein |
| CRO_T029498 | AT2G38160 (4.00E-10) | unknown protein |
| CRO_T030731 | AT5G40380 (7.00E-94) | CRK42|cysteine-rich RLK (RECEPTOR-like protein kinase) 42 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000662 | protein histidine kinase activity peptidyl-histidine phosphorylation peptidyl-tyrosine dephosphorylation ADP binding protein tyrosine phosphatase activity phosphoprotein phosphatase activity polysaccharide binding defense response protein dephosphorylation anchored component of plasma membrane hydrolase activity, hydrolyzing O-glycosyl compounds integral component of membrane | details |
| CFinderADM001457 | methylthioribulose 1-phosphate dehydratase activity 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase activity acireductone synthase activity cAMP-dependent protein kinase activity L-methionine biosynthetic process from S-adenosylmethionine S-methyl-5-thio-α-D-ribose 1-phosphate degradation Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase L-methionine biosynthetic process from methylthioadenosine cell surface receptor signaling pathway Cysteine and methionine metabolism dephosphorylation polysaccharide binding magnesium ion binding protein dimerization activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 protein phosphorylation | details |
| CFinderADM001949 | Transcription_related, Transcription factor: G2-like ER membrane protein complex protein folding in endoplasmic reticulum glutathione peroxidase activity Arachidonic acid metabolism glutathione-peroxide redox reactions reactive oxygen species degradation intracellular part single-organism metabolic process response to oxidative stress cellular oxidant detoxification Ubiquitin_Proteasome_system, E3 adaptor: DWD oxidoreductase activity | details |
| CFinderADM002217 | mannose-1-phosphate guanylyltransferase (GDP) activity GDP-mannose biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase Fructose and mannose metabolism NF-kappa B signaling pathway Phenylpropanoid biosynthesis biosynthetic process adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| CFinderADM002299 | Ubiquitin_Proteasome_system, E3 adaptor: DWD protein phosphorylation cutin biosynthetic process myosin heavy chain kinase activity glycerol-3-phosphate 2-O-acyltransferase activity Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase CDP-diacylglycerol biosynthesis I phosphatase activity diacylglycerol and triacylglycerol biosynthesis Fanconi anemia pathway Glycerolipid metabolism NF-kappa B signaling pathway dephosphorylation adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 protein serine/threonine kinase activity plasma membrane | details |
Expression profiles
 Show details about module gene expression profiling |