CFinderADM001734's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| L-cystine transport | 1.57E-05 | GO:0015811 |
| protein glutathionylation | 1.57E-05 | GO:0010731 |
| L-cystine transmembrane transporter activity | 1.57E-05 | GO:0015184 |
| 'de novo' L-methionine biosynthetic process | 1.75E-05 | GO:0071266 |
| seleno-amino acid biosynthesis | 1.90E-05 | plantCyc |
| cystathionine beta-lyase activity | 2.62E-05 | GO:0004121 |
| glucosinolate metabolic process | 2.75E-05 | GO:0019760 |
| chloroplast stroma | 0.000113941 | GO:0009570 |
| proteasome core complex, alpha-subunit complex | 0.000162904 | GO:0019773 |
| threonine-type endopeptidase activity | 0.000331141 | GO:0004298 |
| glutathione metabolic process | 0.00085394 | GO:0006749 |
| Glutathione metabolism | 0.000895099 | KEGG pathway |
| Lysosome | 0.000895099 | KEGG pathway |
| Proteasome | 0.000895099 | KEGG pathway |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.000945886 | cazy family |
| glutathione transferase activity | 0.000964968 | GO:0004364 |
| ubiquitin-dependent protein catabolic process | 0.001852339 | GO:0006511 |
| peptidase activity | 0.002155874 | GO:0008233 |
| Biosynthesis of amino acids | 0.002746765 | KEGG pathway |
| transferase activity, transferring glycosyl groups | 0.002885502 | GO:0016757 |
| pyridoxal phosphate binding | 0.003609505 | GO:0030170 |
| vacuolar membrane | 0.008979106 | GO:0005774 |
| endosome | 0.008979106 | GO:0005768 |
| trans-Golgi network | 0.008979106 | GO:0005802 |
| proteolysis | 0.01538002 | GO:0006508 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002097 | AT1G64660 (1.00E-24) | ATMGL|methionine gamma-lyase |
| CRO_T004501 | AT1G04910 (0) | O-fucosyltransferase family protein |
| CRO_T014005 | - | - |
| CRO_T017142 | AT2G23970 (4.00E-32) | Class I glutamine amidotransferase-like superfamily protein |
| CRO_T020398 | AT5G40670 (5.00E-71) | PQ-loop repeat family protein / transmembrane family protein |
| CRO_T033795 | AT3G22110 (4.00E-89) | PAC1|20S proteasome alpha subunit C1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000930 | seleno-amino acid biosynthesis nuclear euchromatin FACT complex pre-autophagosomal structure membrane ATG1/ULK1 kinase complex Transcription_related, Transcription regulator: HMG cystathionine beta-lyase activity positive regulation of protein phosphorylation 'de novo' L-methionine biosynthetic process autophagosome assembly polar nucleus fusion protein kinase binding Autophagy - yeast vegetative to reproductive phase transition of meristem cellular transition metal ion homeostasis transition metal ion binding metal ion transport DNA replication Biosynthesis of amino acids DNA repair 2-alkenal reductase [NAD(P)] activity pyridoxal phosphate binding plasmodesma chloroplast stroma transcription, DNA-templated regulation of transcription, DNA-templated DNA binding | details |
Expression profiles
 Show details about module gene expression profiling |