CFinderADM001748's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Phospholipase D signaling pathway | 2.36E-06 | KEGG pathway |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 4.94E-05 | cazy family |
| protein ADP-ribosylation | 0.000100089 | GO:0006471 |
| regulation of signal transduction | 0.000117888 | GO:0009966 |
| beta-galactosidase activity | 0.000749133 | GO:0004565 |
| small GTPase mediated signal transduction | 0.002324582 | GO:0007264 |
| vesicle-mediated transport | 0.002324582 | GO:0016192 |
| intracellular protein transport | 0.004768815 | GO:0006886 |
| protein ubiquitination | 0.004900363 | GO:0016567 |
| transporter activity | 0.006269017 | GO:0005215 |
| carbohydrate binding | 0.006269017 | GO:0030246 |
| ubiquitin-protein transferase activity | 0.006269017 | GO:0004842 |
| plant-type cell wall | 0.007157669 | GO:0009505 |
| vacuolar membrane | 0.007157669 | GO:0005774 |
| GTP binding | 0.010482348 | GO:0005525 |
| Golgi apparatus | 0.01086068 | GO:0005794 |
| carbohydrate metabolic process | 0.011620451 | GO:0005975 |
| hydrolase activity | 0.026975308 | GO:0016787 |
| integral component of membrane | 0.043949623 | GO:0016021 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004219 | AT3G22950 (5.00E-19) | ARFC1|ADP-ribosylation factor C1 |
| CRO_T011994 | AT2G39910 (5.00E-89) | ARM repeat superfamily protein |
| CRO_T024029 | AT2G32810 (4.00E-79) | BGAL9|beta galactosidase 9; BGAL9|beta-galactosidase 9 |
| CRO_T024755 | AT4G39050 (0.000001) | Kinesin motor family protein |
| CRO_T030147 | AT1G14670 (0) | Endomembrane protein 70 protein family |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000748 | regulation of signal transduction β-alanine biosynthesis II trans-cinnamoyl-CoA biosynthesis 4-hydroxybenzoate biosynthesis I (eukaryotes) umbelliferone biosynthesis long-chain fatty acid activation D-myo-inositol (1,4,5)-trisphosphate biosynthesis fatty acid β-oxidation II (peroxisome) oleate biosynthesis I (plants) 3-phosphoinositide biosynthesis cutin biosynthesis Flavonoid biosynthesis stearate biosynthesis II (bacteria and plants) integral component of membrane sporopollenin precursors biosynthesis phosphatidylcholine acyl editing suberin monomers biosynthesis palmitate biosynthesis II (bacteria and plants) Phenylpropanoid biosynthesis intracellular signal transduction protein ubiquitination ubiquitin-protein transferase activity catalytic activity metabolic process intracellular | details |
| CFinderADM001580 | intracellular protein transport Phospholipase D signaling pathway regulation of vacuole fusion, non-autophagic vesicle fusion with vacuole negative regulation of embryonic development endosomal transport regulation of SNARE complex assembly protein ADP-ribosylation HOPS complex lysosomal membrane Ubiquitin_Proteasome_system, DUB: USP Autophagy - yeast plant-type vacuole membrane small GTPase mediated signal transduction vesicle-mediated transport actin binding endosome methylation methyltransferase activity transporter activity Golgi apparatus GTP binding | details |
| CFinderADM001723 | cellular lipid metabolic process regulation of signal transduction carboxylic ester hydrolase activity 3-phosphoinositide biosynthesis D-myo-inositol (1,4,5)-trisphosphate biosynthesis integral component of membrane intracellular signal transduction protein ubiquitination ubiquitin-protein transferase activity intracellular zinc ion binding | details |
Expression profiles
 Show details about module gene expression profiling |