CFinderADM001827's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 3.53E-06 | cazy family |
| UDP-arabinopyranose mutase activity | 1.71E-05 | GO:0052691 |
| fructose-bisphosphate aldolase activity | 1.79E-05 | GO:0004332 |
| plant-type cell wall biogenesis | 4.14E-05 | GO:0009832 |
| UDP-L-arabinose metabolic process | 4.14E-05 | GO:0033356 |
| protein tyrosine phosphatase activity | 0.000119271 | GO:0004725 |
| cellulose biosynthetic process | 0.00044624 | GO:0030244 |
| glycolytic process | 0.00044624 | GO:0006096 |
| Calvin-Benson-Bassham cycle | 0.000653498 | plantCyc |
| gluconeogenesis I | 0.000653498 | plantCyc |
| glycolysis I (from glucose 6-phosphate) | 0.000653498 | plantCyc |
| glycolysis IV (plant cytosol) | 0.000653498 | plantCyc |
| sucrose biosynthesis I (from photosynthesis) | 0.000653498 | plantCyc |
| transferase activity, transferring glycosyl groups | 0.001650301 | GO:0016757 |
| Amino sugar and nucleotide sugar metabolism | 0.002147983 | KEGG pathway |
| cell wall organization | 0.003173608 | GO:0071555 |
| Carbon metabolism | 0.011567188 | KEGG pathway |
| cell wall | 0.017075503 | GO:0005618 |
| Golgi apparatus | 0.017075503 | GO:0005794 |
| extracellular region | 0.017075503 | GO:0005576 |
| plasmodesma | 0.018641392 | GO:0009506 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001407 | AT1G06150 (8.00E-93) | EMB1444|EMBRYO DEFECTIVE 1444 |
| CRO_T015859 | AT3G62010 (3.00E-13) | unknown protein |
| CRO_T019024 | AT2G36460 (2.00E-131) | FBA6|fructose-bisphosphate aldolase 6 |
| CRO_T023678 | AT3G02230 (0) | ATRGP1|REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1 |
| CRO_T031991 | AT2G47220 (5.00E-28) | ATDUF5|DOMAIN OF UNKNOWN FUNCTION 724 5 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000657 | Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase mRNA surveillance pathway cellular process microtubule intracellular part plastid adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | details |
| CFinderADM002308 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides interstrand cross-link repair nuclease activity DNA binding zinc ion binding Fanconi anemia pathway nucleic acid phosphodiester bond hydrolysis Protein processing in endoplasmic reticulum Ubiquitin_Proteasome_system, E3: RING chloroplast | details |
Expression profiles
 Show details about module gene expression profiling |