CFinderADM001837's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| TOR signaling | 6.93E-06 | GO:0031929 |
| TORC1 complex | 6.93E-06 | GO:0031931 |
| PI3K-Akt signaling pathway | 2.36E-05 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase | 2.36E-05 | kinase family |
| MicroRNAs in cancer | 2.97E-05 | KEGG pathway |
| L-amino acid transmembrane transporter activity | 0.000160753 | GO:0015179 |
| amino acid transmembrane transport | 0.000542904 | GO:0003333 |
| antiporter activity | 0.003107624 | GO:0015297 |
| integral component of plasma membrane | 0.004316546 | GO:0005887 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.004336825 | ubs family |
| ligase activity | 0.004383496 | GO:0016874 |
| phosphorylation | 0.009058042 | GO:0016310 |
| kinase activity | 0.01100039 | GO:0016301 |
| nucleotide binding | 0.036737446 | GO:0000166 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001030 | AT1G23700 (1.00E-79) | Protein kinase superfamily protein |
| CRO_T001334 | AT1G11020 (4.00E-14) | RING/FYVE/PHD zinc finger superfamily protein |
| CRO_T007553 | - | - |
| CRO_T009309 | AT3G03720 (2.00E-28) | CAT4|cationic amino acid transporter 4 |
| CRO_T011109 | AT3G08850 (7.00E-15) | ATRAPTOR1B; RAPTOR1; RAPTOR1B|HEAT repeat ; WD domain, G-beta repeat protein protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001720 | MicroRNAs in cancer Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase L-amino acid transmembrane transporter activity amino acid transmembrane transport Transcription_related, Transcription factor: C2H2 antiporter activity integral component of plasma membrane calcium ion binding kinase activity phosphorylation nucleotide binding | details |
| CFinderADM001836 | MicroRNAs in cancer L-amino acid transmembrane transporter activity antiporter activity Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase integral component of plasma membrane L-amino acid transport long-day photoperiodism nuclear-transcribed mRNA catabolic process, nonsense-mediated decay L-alpha-amino acid transmembrane transport sugar mediated signaling pathway COPII vesicle coat response to wounding cytoplasmic mRNA processing body salicylic acid mediated signaling pathway jasmonic acid mediated signaling pathway cytosol zinc ion binding ER to Golgi vesicle-mediated transport amino acid transmembrane transport defense response to bacterium helicase activity RNA transport intracellular protein transport kinase activity plasmodesma phosphorylation | details |
| CFinderADM002029 | regulation of calcium or calmodulin-mediated signal transduction in response to host detection of calcium ion modulation by symbiont of host calcium or calmodulin-mediated signal transduction regulation of photomorphogenesis calcium-mediated signaling spliceosomal complex assembly Mitophagy - yeast U12-type spliceosomal complex U2-type prespliceosome U2 snRNP Ras signaling pathway catalytic step 2 spliceosome mRNA binding microtubule-severing ATPase activity metalloendopeptidase activity small GTPase mediated signal transduction protein binding 2-alkenal reductase [NAD(P)] activity Endocytosis Spliceosome GTP binding calcium ion binding proteolysis intracellular | details |
Expression profiles
 Show details about module gene expression profiling |