CFinderADM001982's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| regulation of tocopherol cyclase activity | 1.48E-05 | GO:1902171 |
| chloroplast | 9.01E-05 | GO:0009507 |
| plastoglobule | 9.01E-05 | GO:0010287 |
| protein stabilization | 0.000111119 | GO:0050821 |
| glycerol ether metabolic process | 0.000281102 | GO:0006662 |
| cellular response to oxidative stress | 0.000345763 | GO:0034599 |
| sulfate assimilation | 0.000345763 | GO:0000103 |
| oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 0.000745376 | GO:0016671 |
| Transcription_related, Transcription factor: MYB | 0.000973148 | TF family |
| protein disulfide oxidoreductase activity | 0.001399442 | GO:0015035 |
| cell redox homeostasis | 0.002383097 | GO:0045454 |
| protein folding | 0.00357732 | GO:0006457 |
| protein kinase activity | 0.021198021 | GO:0004672 |
| protein phosphorylation | 0.044714534 | GO:0006468 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T013567 | AT3G55730 (1.00E-71) | AtMYB109|myb domain protein 109 |
| CRO_T013969 | AT1G29700 (6.00E-51) | Metallo-hydrolase/oxidoreductase superfamily protein |
| CRO_T014411 | AT3G46730 (6.00E-52) | NB-ARC domain-containing disease resistance protein |
| CRO_T015889 | AT1G79600 (0) | ABC1K3|ABC1-like kinase 3 |
| CRO_T019218 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000957 | purine ribonucleotide metabolic process adenylylsulfatase activity sulfur compound metabolic process maturation of LSU-rRNA Transcription_related, Transcription regulator: SNF2 ATPase activity, coupled to transmembrane movement of substances Peroxisome cytosolic large ribosomal subunit ATP binding Ribosome chloroplast thylakoid membrane chloroplast envelope transmembrane transport translation RNA binding structural constituent of ribosome | details |
| CFinderADM000958 | violaxanthin de-epoxidase activity L-ascorbic acid transporter activity zeaxanthin, antheraxanthin and violaxanthin interconversion xanthophyll cycle L-ascorbic acid transport protein-disulfide reductase activity pollen tube guidance regulation of pollen tube growth cellular lipid metabolic process inorganic phosphate transmembrane transporter activity anion transmembrane transport pollen tube growth Carotenoid biosynthesis chloroplast inner membrane cell redox homeostasis oxidation-reduction process chloroplast thylakoid membrane DNA binding cytosol | details |
| CFinderADM001595 | chloroplast thylakoid membrane regulation of tocopherol cyclase activity protein stabilization plastoglobule heat shock protein binding glutathione metabolic process glutathione transferase activity unfolded protein binding protein disulfide oxidoreductase activity cell redox homeostasis electron carrier activity ATP binding chloroplast envelope protein kinase activity protein phosphorylation | details |
| CFinderADM002073 | Transcription_related, Transcription factor: MYB transport Ubiquitin_Proteasome_system, E3: RING | details |
| CFinderADM002113 | phosphoenolpyruvate:phosphate antiporter activity phosphoglycerate transmembrane transporter activity phosphoglycerate transport phosphoenolpyruvate transmembrane transport cyclin-dependent protein serine/threonine kinase activity enzyme activator activity positive regulation of catalytic activity regulation of cell cycle carbohydrate transmembrane transport oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor glycerol ether metabolic process cellular response to oxidative stress sulfate assimilation regulation of catalytic activity protein disulfide oxidoreductase activity response to stimulus regulation of cellular process cell redox homeostasis protein folding intracellular part Ubiquitin_Proteasome_system, E3 adaptor: DWD chloroplast thylakoid membrane | details |
Expression profiles
 Show details about module gene expression profiling |