CFinderADM002124's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| inflorescence morphogenesis | 5.36E-05 | GO:0048281 |
| response to fungus | 6.43E-05 | GO:0009620 |
| Viral carcinogenesis | 7.05E-05 | KEGG pathway |
| lateral root formation | 9.29E-05 | GO:0010311 |
| photomorphogenesis | 0.000121365 | GO:0009640 |
| unidimensional cell growth | 0.000309915 | GO:0009826 |
| auxin polar transport | 0.00033286 | GO:0009926 |
| metal ion binding | 0.000627177 | GO:0046872 |
| response to auxin | 0.000646693 | GO:0009733 |
| ligase activity | 0.002595594 | GO:0016874 |
| plasmodesma | 0.024078839 | GO:0009506 |
| zinc ion binding | 0.04477964 | GO:0008270 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002214 | AT1G65920 (0) | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| CRO_T010045 | AT3G02260 (0) | ASA1|ATTENUATED SHADE AVOIDANCE 1; BIG|BIG; CRM1|CORYMBOSA1; DOC1|DARK OVER-EXPRESSION OF CAB 1; LPR1|LOW PHOSPHATE-RESISTANT ROOT 1; TIR3|TRANSPORT INHIBITOR RESPONSE 3; UMB1|UMBRELLA 1 |
| CRO_T015158 | - | - |
| CRO_T017288 | AT3G23270 (5.00E-22) | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| CRO_T026325 | AT1G30470 (1.00E-111) | SIT4 phosphatase-associated family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001845 | inflorescence morphogenesis response to fungus Viral carcinogenesis lateral root formation photomorphogenesis unidimensional cell growth auxin polar transport response to auxin plasmodesma | details |
| CFinderADM002050 | Ubiquitin_Proteasome_system, E3: RING Transcription_related, Transcription factor: LOB proteasome-mediated ubiquitin-dependent protein catabolic process protein ubiquitination ubiquitin protein ligase activity | details |
| CFinderADM002132 | chlorophyllase activity innate immune response regulation of vesicle fusion activation of GTPase activity chlorophyll catabolic process Rab GTPase binding Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII non-membrane spanning protein tyrosine kinase activity GTPase activator activity Porphyrin and chlorophyll metabolism peptidyl-tyrosine phosphorylation fatty acid biosynthetic process intracellular protein transport endomembrane system Oxidative phosphorylation intracellular protein serine/threonine kinase activity | details |
| CFinderADM002254 | detection of nutrient organ senescence vegetative phase change developmental process involved in reproduction Protein_kinases_phosphatases, PPC:3.1.1: Casein Kinase I Family protein serine/threonine kinase activity inorganic diphosphatase activity protein tyrosine kinase activity hydrogen-translocating pyrophosphatase activity Apelin signaling pathway sugar mediated signaling pathway primary root development Wnt signaling pathway Transcription_related, Transcription regulator: mTERF regulation of cell shape Endocytosis cytoplasm peptidyl-tyrosine phosphorylation proton transport abscisic acid-activated signaling pathway peptidyl-serine phosphorylation nucleus intracellular signal transduction ATP binding transmembrane transport | details |
Expression profiles
 Show details about module gene expression profiling |