CFinderADM002126's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Transcription_related, Transcription factor: WRKY | 3.10E-09 | TF family |
| glutathione-glutaredoxin redox reactions | 1.37E-05 | plantCyc |
| glutathione-peroxide redox reactions | 3.43E-05 | plantCyc |
| glutathione-disulfide reductase activity | 4.94E-05 | GO:0004362 |
| tRNA aminoacylation for protein translation | 0.000131546 | GO:0006418 |
| aminoacyl-tRNA ligase activity | 0.000135791 | GO:0004812 |
| mitochondrion | 0.000305619 | GO:0005739 |
| Glutathione metabolism | 0.000673236 | KEGG pathway |
| Aminoacyl-tRNA biosynthesis | 0.000674465 | KEGG pathway |
| glutathione metabolic process | 0.001192688 | GO:0006749 |
| NADP binding | 0.001769201 | GO:0050661 |
| cell redox homeostasis | 0.002821182 | GO:0045454 |
| cellular oxidant detoxification | 0.003219637 | GO:0098869 |
| copper ion binding | 0.00491696 | GO:0005507 |
| flavin adenine dinucleotide binding | 0.00491696 | GO:0050660 |
| ATP binding | 0.005311714 | GO:0005524 |
| sequence-specific DNA binding | 0.009682129 | GO:0043565 |
| transcription factor activity, sequence-specific DNA binding | 0.016106505 | GO:0003700 |
| nucleic acid binding | 0.024561882 | GO:0003676 |
| chloroplast stroma | 0.025943751 | GO:0009570 |
| regulation of transcription, DNA-templated | 0.049904405 | GO:0006355 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T015637 | AT3G13490 (1.00E-15) | ATKRS-2|LYSYL-TRNA SYNTHETASE 2; OVA5|OVULE ABORTION 5 |
| CRO_T019323 | AT5G22790 (1.00E-19) | RER1|reticulata-related 1 |
| CRO_T030654 | AT5G64810 (8.00E-22) | ATWRKY51|WRKY DNA-BINDING PROTEIN 51 |
| CRO_T031986 | AT1G55600 (1.00E-19) | MINI3|MINISEED 3; WRKY10|WRKY DNA-binding protein 10 |
| CRO_T032642 | AT3G54660 (8.00E-176) | GR|glutathione reductase |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000653 | flavin adenine dinucleotide binding folate polyglutamylation II tetrahydrofolylpolyglutamate synthase activity tetrahydrofolylpolyglutamate biosynthetic process xanthine dehydrogenase activity glutathione-disulfide reductase activity oxidoreductase activity, acting on the aldehyde or oxo group of donors glutathione-glutaredoxin redox reactions xanthine catabolic process chloroplast stroma folate polyglutamylation glutathione-peroxide redox reactions malate transport tetrahydrofolate biosynthesis II Folate biosynthesis one-carbon metabolic process serine-type peptidase activity malate transmembrane transporter activity Carotenoid biosynthesis Glutathione metabolism serine-type carboxypeptidase activity 2 iron, 2 sulfur cluster binding oxidoreductase activity, acting on CH-OH group of donors NADP binding glutathione metabolic process plant-type vacuole membrane proteolysis involved in cellular protein catabolic process cell redox homeostasis cellular oxidant detoxification electron carrier activity copper ion binding oxidation-reduction process ATP binding proteolysis iron ion binding | details |
| CFinderADM001685 | aspartate-tRNA ligase activity protein maturation by iron-sulfur cluster transfer tRNA aminoacylation for protein translation ferrous iron binding iron-sulfur cluster assembly Aminoacyl-tRNA biosynthesis chloroplast 2 iron, 2 sulfur cluster binding 4 iron, 4 sulfur cluster binding mitochondrial matrix chloroplast envelope nucleic acid binding | details |
| CFinderADM002216 | Transcription_related, Transcription factor: WRKY hydrolase activity, acting on acid anhydrides transcription factor activity, sequence-specific DNA binding protein targeting to chloroplast tRNA aminoacylation for protein translation regulation of transcription, DNA-templated aminoacyl-tRNA ligase activity Aminoacyl-tRNA biosynthesis Transcription_related, Transcription factor: ERF sequence-specific DNA binding GTP binding transcription, DNA-templated nucleic acid binding | details |
Expression profiles
 Show details about module gene expression profiling |