CFinderADM002148's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| S-adenosylmethionine-dependent methyltransferase activity | 0.00130763 | GO:0008757 |
| chloroplast thylakoid | 0.001325043 | GO:0009534 |
| vacuolar membrane | 0.002656706 | GO:0005774 |
| endosome | 0.002656706 | GO:0005768 |
| trans-Golgi network | 0.002656706 | GO:0005802 |
| methylation | 0.003533036 | GO:0032259 |
| calcium ion binding | 0.004475469 | GO:0005509 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000182 | AT1G15930 (2.00E-38) | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein |
| CRO_T003583 | AT1G17100 (6.00E-69) | HBP1|haem-binding protein 1 |
| CRO_T019225 | AT4G28025 (1.00E-22) | unknown protein |
| CRO_T019420 | AT2G44980 (5.00E-117) | ASG3|ALTERED SEED GERMINATION 3; CHR10|chromatin remodeling 10 |
| CRO_T031439 | AT1G30900 (0) | BP80-3; 3|binding protein of 80 kDa 3; 3; VSR3; 3|VACUOLAR SORTING RECEPTOR 3; 3; VSR6|VACUOLAR SORTING RECEPTOR 6 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM000673 | calcium ion binding | details |
| CFinderADM001187 | anther wall tapetum development trichome morphogenesis N-terminal protein amino acid acetylation peptide alpha-N-acetyltransferase activity protein acetyltransferase complex Transcription_related, Transcription factor: RWP-RK Transcription_related, Transcription regulator: GNAT chloroplast thylakoid Transcription_related, Transcription factor: MYB sequence-specific DNA binding | details |
| CFinderADM001385 | chloroplast thylakoid calcium ion binding nucleotide binding | details |
| CFinderADM002111 | chloroplast thylakoid acetylglutamate kinase regulator activity regulation of nitrogen utilization regulation of fatty acid biosynthetic process regulation of phosphorylation anthocyanin-containing compound biosynthetic process regulation of catalytic activity magnesium ion binding transmembrane transport transcription, DNA-templated regulation of transcription, DNA-templated | details |
Expression profiles
 Show details about module gene expression profiling |