CFinderADM002156's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| methylammonium transport | 1.28E-05 | GO:0015843 |
| oxidation-reduction process | 1.36E-05 | GO:0055114 |
| Linoleic acid metabolism | 1.83E-05 | KEGG pathway |
| oxylipin biosynthetic process | 3.82E-05 | GO:0031408 |
| organic cation transport | 3.82E-05 | GO:0015695 |
| nitrogen utilization | 3.82E-05 | GO:0019740 |
| ammonium transmembrane transport | 4.67E-05 | GO:0072488 |
| ammonium transmembrane transporter activity | 0.000196511 | GO:0008519 |
| oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 0.000273028 | GO:0016702 |
| ethylene biosynthesis I (plants) | 0.000425829 | plantCyc |
| gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) | 0.000425829 | plantCyc |
| gibberellin biosynthesis III (early C-13 hydroxylation) | 0.000425829 | plantCyc |
| leucodelphinidin biosynthesis | 0.000425829 | plantCyc |
| pinobanksin biosynthesis | 0.000425829 | plantCyc |
| flavonol biosynthesis | 0.000502329 | plantCyc |
| traumatin and (Z)-3-hexen-1-yl acetate biosynthesis | 0.000502329 | plantCyc |
| Flavonoid biosynthesis | 0.000527728 | KEGG pathway |
| flavonoid biosynthesis (in equisetum) | 0.000527728 | plantCyc |
| jasmonic acid biosynthesis | 0.000527728 | plantCyc |
| syringetin biosynthesis | 0.000527728 | plantCyc |
| Plant-pathogen interaction | 0.000946997 | KEGG pathway |
| benzoate biosynthesis I (CoA-dependent, β-oxidative) | 0.001185013 | plantCyc |
| fatty acid biosynthetic process | 0.001369266 | GO:0006633 |
| lipid metabolic process | 0.001576931 | GO:0006629 |
| dioxygenase activity | 0.005247752 | GO:0051213 |
| integral component of plasma membrane | 0.007341065 | GO:0005887 |
| iron ion binding | 0.021214499 | GO:0005506 |
| oxidoreductase activity | 0.025570155 | GO:0016491 |
| hydrolase activity | 0.025570155 | GO:0016787 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T017363 | AT2G38290 (4.00E-12) | AMT2|ammonium transporter 2; AMT2; 1|AMMONIUM TRANSPORTER 2; 1 |
| CRO_T019871 | AT4G10490 (5.00E-42) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T020621 | AT3G21360 (6.00E-148) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T028514 | AT1G17420 (0) | ATLOX3|lipoxygenase 3 |
| CRO_T030575 | AT3G48080 (1.00E-130) | alpha/beta-Hydrolases superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001156 | methylammonium transport organic cation transport nitrogen utilization ammonium transmembrane transport ammonium transmembrane transporter activity histidine phosphotransfer kinase activity Transcription_related, Transcription factor: Orphans protein autophosphorylation actin binding signal transduction zinc ion binding protein homodimerization activity chloroplast envelope integral component of plasma membrane intracellular chloroplast stroma ATP binding | details |
| CFinderADM001668 | response to very low light intensity stimulus oxidoreductase activity vegetative to reproductive phase transition of meristem oxidation-reduction process plastid chloroplast envelope chloroplast stroma hydrolase activity | details |
Expression profiles
 Show details about module gene expression profiling |