CFinderADM002165's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| integral component of chloroplast outer membrane | 2.50E-05 | GO:0031359 |
| starch degradation II | 3.62E-05 | plantCyc |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 5.75E-05 | cazy family |
| Transcription_related, Transcription factor: RWP-RK | 5.75E-05 | TF family |
| cation transport | 9.01E-05 | GO:0006812 |
| ion channel activity | 0.000110081 | GO:0005216 |
| chloroplast inner membrane | 0.000262169 | GO:0009706 |
| ER to Golgi vesicle-mediated transport | 0.000646754 | GO:0006888 |
| ion transmembrane transport | 0.000646754 | GO:0034220 |
| hydrolase activity, acting on glycosyl bonds | 0.001293615 | GO:0016798 |
| Starch and sucrose metabolism | 0.002958077 | KEGG pathway |
| GTPase activity | 0.00849219 | GO:0003924 |
| Golgi apparatus | 0.008808744 | GO:0005794 |
| carbohydrate metabolic process | 0.014510802 | GO:0005975 |
| GTP binding | 0.01526867 | GO:0005525 |
| hydrolase activity | 0.035364712 | GO:0016787 |
| nucleic acid binding | 0.035364712 | GO:0003676 |
| nucleotide binding | 0.04322443 | GO:0000166 |
| mitochondrion | 0.049789444 | GO:0005739 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T009062 | AT1G76350 (1.00E-19) | NLP5|NIN-like protein 5 |
| CRO_T018836 | AT2G43950 (1.00E-68) | ATOEP37|ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37; OEP37|chloroplast outer envelope protein 37 |
| CRO_T026747 | AT1G53710 (1.00E-146) | Calcineurin-like metallo-phosphoesterase superfamily protein |
| CRO_T029188 | AT3G61760 (0) | ADL1B|DYNAMIN-like 1B |
| CRO_T029426 | AT1G70200 (6.00E-50) | RNA-binding (RRM/RBD/RNP motifs) family protein |
| CRO_T030132 | AT3G23920 (5.00E-116) | BAM1|beta-amylase 1; BMY7|BETA-AMYLASE 7 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001161 | Protein_kinases_phosphatases, PPC:1.15.3: Leucine Rich Repeat Kinase IV starch degradation II hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc transferase activity, transferring phosphorus-containing groups calcium-dependent phospholipid binding hydrolase activity, acting on glycosyl bonds cell part N-Glycan biosynthesis Starch and sucrose metabolism calcium ion binding carbohydrate metabolic process plasmodesma | details |
| CFinderADM001187 | anther wall tapetum development trichome morphogenesis N-terminal protein amino acid acetylation peptide alpha-N-acetyltransferase activity protein acetyltransferase complex Transcription_related, Transcription factor: RWP-RK Transcription_related, Transcription regulator: GNAT chloroplast thylakoid Transcription_related, Transcription factor: MYB sequence-specific DNA binding | details |
| CFinderADM002096 | integral component of chloroplast outer membrane plastid part ion channel activity chloroplast inner membrane cation transport Transcription_related, Transcription factor: C3H glycerol ether metabolic process sulfate assimilation cellular response to oxidative stress oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor ion transmembrane transport protein disulfide oxidoreductase activity phosphoprotein phosphatase activity cell redox homeostasis protein dephosphorylation protein folding RNA binding mitochondrion | details |
Expression profiles
 Show details about module gene expression profiling |