CFinderADM002247's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| γ-glutamyl cycle | 2.36E-06 | plantCyc |
| Transcription_related, Transcription factor: C2C2-GATA | 6.49E-05 | TF family |
| pollen tube development | 8.28E-05 | GO:0048868 |
| embryo sac development | 0.000241004 | GO:0009553 |
| FMN binding | 0.000607085 | GO:0010181 |
| pollen development | 0.000656566 | GO:0009555 |
| rRNA binding | 0.001803244 | GO:0019843 |
| embryo development ending in seed dormancy | 0.002027966 | GO:0009793 |
| Carbon metabolism | 0.008328376 | KEGG pathway |
| oxidoreductase activity | 0.017347149 | GO:0016491 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008344 | AT3G14415 (2.00E-177) | GOX2|glycolate oxidase 2 |
| CRO_T011915 | AT3G02910 (2.00E-55) | AIG2-like (avirulence induced gene) family protein |
| CRO_T015216 | AT1G51570 (0) | Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein |
| CRO_T020471 | AT1G08010 (8.00E-33) | GATA11|GATA transcription factor 11 |
| CRO_T030124 | AT3G53170 (8.00E-89) | Tetratricopeptide repeat (TPR)-like superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| CFinderADM000002 | Transcription_related, Transcription factor: M-type phosphatidylethanolamine binding L-alanine biosynthesis III nickel cation binding photoperiodism, flowering molybdenum cofactor biosynthesis transferase activity, transferring alkyl or aryl (other than methyl) groups regulation of flower development nitrogen compound metabolic process Circadian rhythm - plant Transcription_related, Transcription factor: G2-like transferase activity, transferring hexosyl groups Transcription_related, Transcription factor: MYB-related DNA-directed RNA polymerase activity Terpenoid backbone biosynthesis Transcription_related, Transcription factor: B3 multicellular organism development Transcription_related, Transcription factor: NAC binding Transcription_related, Transcription factor: FAR1 transcription, DNA-templated GTPase activity Purine metabolism | details |
| CFinderADM001078 | cutin biosynthetic process Cytochrome_P450, Cytochrome P450: CYP77A very long-chain fatty acid-CoA ligase activity fatty acid in-chain hydroxylase activity Transcription_related, Transcription factor: C2C2-YABBY inflorescence meristem growth abaxial cell fate specification specification of organ position specification of floral organ identity γ-glutamyl cycle vernolate biosynthesis I fruit development long-chain fatty acid metabolic process long-chain fatty acid-CoA ligase activity meristem structural organization lateral root formation myricetin 3'-O-methyltransferase activity 11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity regulation of flower development alkaloid biosynthetic process poly-hydroxy fatty acids biosynthesis defense response to fungus aromatic compound biosynthetic process Stilbenoid, diarylheptanoid and gingerol biosynthesis long-chain fatty acid activation oleate biosynthesis I (plants) cutin biosynthesis stearate biosynthesis II (bacteria and plants) sporopollenin precursors biosynthesis phosphatidylcholine acyl editing vindoline and vinblastine biosynthesis suberin monomers biosynthesis palmitate biosynthesis II (bacteria and plants) Fatty acid metabolism Plant-pathogen interaction protein homodimerization activity oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen secondary metabolite biosynthetic process methylation calcium ion binding iron ion binding heme binding endoplasmic reticulum plasmodesma | details |
| CFinderADM001401 | γ-glutamyl cycle nuclear proteasome complex cytosolic proteasome complex proteasome regulatory particle, base subcomplex positive regulation of proteasomal protein catabolic process positive regulation of RNA polymerase II transcriptional preinitiation complex assembly peptidyl-tyrosine dephosphorylation ER-associated ubiquitin-dependent protein catabolic process TBP-class protein binding proteasome-activating ATPase activity protein tyrosine phosphatase activity Proteasome peptidase activity | details |
| CFinderADM001853 | Carbon metabolism Vitamin B6 metabolism Transcription_related, Transcription regulator: LIM fructose 6-phosphate metabolic process glycolytic process through fructose-6-phosphate choline biosynthesis I Protein_kinases_phosphatases, PPC:4.2.4: SNF1 Related Protein Kinase (SnRK) 6-phosphofructokinase activity cytoplasm glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) phosphatase activity FMN binding MAPK signaling pathway - plant dephosphorylation intracellular signal transduction ATP binding oxidoreductase activity | details |
Expression profiles
 Show details about module gene expression profiling |