TissueCFM000089's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| inorganic anion exchanger activity | 0.003693308 | GO:0005452 |
| histone methyltransferase activity (H3-K27 specific) | 0.003693308 | GO:0046976 |
| regulation of DNA replication | 0.006433793 | GO:0006275 |
| DNA mediated transformation | 0.006433793 | GO:0009294 |
| histone H3-K27 methylation | 0.006433793 | GO:0070734 |
| inorganic anion transport | 0.006433793 | GO:0015698 |
| anion transmembrane transport | 0.008038082 | GO:0098656 |
| regulation of intracellular pH | 0.008038082 | GO:0051453 |
| Transcription_related, Transcription regulator: PHD | 0.017025301 | TF family |
| Transcription_related, Transcription regulator: SET | 0.017025301 | TF family |
| pollen development | 0.018795937 | GO:0009555 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000477 | AT5G65290 (0) | LMBR1-like membrane protein |
| CRO_T005530 | AT1G05960 (0) | ARM repeat superfamily protein |
| CRO_T005689 | AT1G15460 (0) | ATBOR4|REQUIRES HIGH BORON 4 |
| CRO_T029821 | AT5G09790 (4.00E-90) | ATXR5|ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5; PDE336|PIGMENT DEFECTIVE 336; SDG15|SETDOMAIN GROUP 15 |
| CRO_T029822 | AT5G09790 (2.00E-17) | ATXR5|ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5; PDE336|PIGMENT DEFECTIVE 336; SDG15|SETDOMAIN GROUP 15 |
| CRO_T031014 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000154 | homogalacturonan biosynthesis inorganic anion exchanger activity regulation of intracellular pH anion transmembrane transport pectin biosynthetic process inorganic anion transport polygalacturonate 4-alpha-galacturonosyltransferase activity formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription regulator: PHD Amino sugar and nucleotide sugar metabolism Endocytosis small GTPase mediated signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |