TissueCFM000290's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| negative regulation of post-embryonic development | 0.005995962 | GO:0048581 |
| negative regulation of reproductive process | 0.005995962 | GO:2000242 |
| UDP-glucuronate biosynthetic process | 0.005995962 | GO:0006065 |
| binding | 0.006057659 | GO:0005488 |
| UDP-glucose 6-dehydrogenase activity | 0.006057659 | GO:0003979 |
| UDP-α-D-glucuronate biosynthesis (from UDP-glucose) | 0.006816766 | plantCyc |
| UDP-D-xylose biosynthesis | 0.006816766 | plantCyc |
| UDP-sugars interconversion | 0.006816766 | plantCyc |
| reproductive structure development | 0.011236449 | GO:0048608 |
| single organism reproductive process | 0.014375006 | GO:0044702 |
| post-embryonic development | 0.015715695 | GO:0009791 |
| Transcription_related, Transcription factor: MIKC | 0.027252563 | TF family |
| Pentose and glucuronate interconversions | 0.02954098 | KEGG pathway |
| Plant-pathogen interaction | 0.02954098 | KEGG pathway |
| NAD binding | 0.037710144 | GO:0051287 |
| Transcription_related, Transcription factor: HB | 0.042390093 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T007629 | AT1G05230 (2.00E-172) | HDG2|homeodomain GLABROUS 2 |
| CRO_T007958 | AT1G26570 (0) | ATUGD1|UDP-GLUCOSE DEHYDROGENASE 1 |
| CRO_T012957 | AT4G37940 (2.00E-26) | AGL21|AGAMOUS-like 21 |
| CRO_T013742 | AT3G48880 (2.00E-13) | RNI-like superfamily protein |
| CRO_T015929 | AT1G66400 (3.00E-15) | CML23|calmodulin like 23 |
| CRO_T023759 | - | - |
| CRO_T029780 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000341 | ajmaline and sarpagine biosynthesis Homologous recombination Plant-pathogen interaction Protein_kinases_phosphatases, PPC:1.9.2: S Domain Kinase (Type 2) Transcription_related, Transcription regulator: SNF2 Transcription_related, Transcription factor: ERF | details |
| TissueCFM000511 | secologanin and strictosidine biosynthesis aspartic-type endopeptidase activity geraniol and geranial biosynthesis signal recognition particle, endoplasmic reticulum targeting sinapyl alcohol dehydrogenase activity signal recognition particle binding 7S RNA binding cinnamyl-alcohol dehydrogenase activity ADP binding | details |
Expression profiles
 Show details about module gene expression profiling |