TissueCFM000302's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Glycosylphosphatidylinositol(GPI)-anchor biosynthesis | 0.004425424 | KEGG pathway |
| aerobic respiration I (cytochrome c) | 0.014259339 | plantCyc |
| aerobic respiration III (alternative oxidase pathway) | 0.014259339 | plantCyc |
| NAD/NADH phosphorylation and dephosphorylation | 0.014259339 | plantCyc |
| mitochondrial respiratory chain complex I | 0.014754233 | GO:0005747 |
| nuclear matrix | 0.014754233 | GO:0016363 |
| nuclear envelope | 0.014754233 | GO:0005635 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001334 | AT1G11020 (4.00E-14) | RING/FYVE/PHD zinc finger superfamily protein |
| CRO_T001801 | AT4G20150 (2.00E-33) | unknown protein |
| CRO_T003854 | AT5G17250 (2.00E-118) | Alkaline-phosphatase-like family protein |
| CRO_T007437 | AT1G47200 (2.00E-22) | WPP2|WPP domain protein 2 |
| CRO_T020991 | AT2G44820 (4.00E-16) | unknown protein |
| CRO_T025427 | AT3G14830 (8.00E-179) | unknown protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000916 | cytoplasmic microtubule organization nuclear envelope mitochondrial outer membrane nuclear matrix protein transport microtubule-severing ATPase activity protein binding | details |
| TissueCFM001069 | SAGA-type complex spermine and spermidine degradation III Protein_kinases_phosphatases, PPC:2.1.2: Ankyrin Repeat Domain Kinase chaperone binding | details |
| TissueCFM001070 | spermine and spermidine degradation III Transcription_related, Transcription factor: C3H chaperone binding | details |
Expression profiles
 Show details about module gene expression profiling |