TissueCFM000373's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| glycolipid metabolic process | 0.001034034 | GO:0006664 |
| sulfoquinovosyl diacylglycerol biosynthesis | 0.001034034 | plantCyc |
| catalytic activity | 0.001551052 | GO:0003824 |
| glucosyltransferase activity | 0.001551052 | GO:0046527 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.003722194 | cazy family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001582 | AT1G73160 (9.00E-10) | UDP-Glycosyltransferase superfamily protein |
| CRO_T010974 | - | - |
| CRO_T019648 | - | - |
| CRO_T026554 | AT5G23850 (9.00E-154) | Arabidopsis thaliana protein of unknown function (DUF821) |
| CRO_T026608 | AT5G15330 (1.00E-94) | ATSPX4|SPX DOMAIN GENE 4 |
| CRO_T032154 | AT3G08640 (2.00E-95) | RER3|RETICULATA-RELATED 3 |
| CRO_T033274 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000577 | sulfoquinovosyl diacylglycerol biosynthesis Protein digestion and absorption formation of glycosidic bonds, GlycosylTransferases: GTnc tryptophan synthase activity L-tryptophan biosynthesis cellular amino acid biosynthetic process tryptophan biosynthetic process amino acid transmembrane transport amino acid transmembrane transporter activity Biosynthesis of amino acids pyridoxal phosphate binding | details |
| TissueCFM000615 | Carbon metabolism L-serine biosynthetic process L-serine biosynthesis gluconeogenesis I glycolysis I (from glucose 6-phosphate) glycolytic process Phenylpropanoid biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc L-tryptophan degradation VI (via tryptamine) Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase pyridoxal phosphate binding adenosylhomocysteinase activity glucose-6-phosphate isomerase activity phosphoglycerate dehydrogenase activity aromatic-L-amino-acid decarboxylase activity phosphopyruvate hydratase activity O-phospho-L-serine:2-oxoglutarate aminotransferase activity phosphatidate cytidylyltransferase activity vomilenine glucosyltransferase activity tryptophan synthase activity raucaffricine beta-glucosidase activity S-adenosyl-L-methionine cycle II CDP-diacylglycerol biosynthesis II L-methionine degradation I (to L-homocysteine) strictosidine beta-glucosidase activity S-adenosylmethionine cycle starch metabolic process phosphatidylglycerol biosynthetic process glucosinolate catabolic process CDP-diacylglycerol biosynthetic process | details |
| TissueCFM000616 | tryptophan synthase activity oxidation-reduction process tryptophan biosynthetic process ethylene biosynthesis I (plants) L-tryptophan biosynthesis flavonoid biosynthesis (in equisetum) pyridoxal phosphate binding Phenylpropanoid biosynthesis | details |
| TissueCFM000841 | Carbon metabolism folic acid binding O-phospho-L-serine:2-oxoglutarate aminotransferase activity L-serine biosynthesis tryptophan synthase activity tryptophan biosynthetic process L-serine biosynthetic process magnesium ion transmembrane transport magnesium ion transport RNA modification cellular amino acid biosynthetic process tRNA modification potassium ion binding pyruvate kinase activity magnesium ion transmembrane transporter activity glycolytic process glycolysis I (from glucose 6-phosphate) glycolysis IV (plant cytosol) L-tryptophan biosynthesis Rubisco shunt Biosynthesis of amino acids | details |
| TissueCFM001578 | snRNA transcription electron transport chain magnesium ion transport magnesium ion transmembrane transport Photosynthesis magnesium ion transmembrane transporter activity 2 iron, 2 sulfur cluster binding electron carrier activity | details |
Expression profiles
 Show details about module gene expression profiling |