TissueCFM000404's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.005661614 | cazy family |
| cellulose biosynthesis | 0.006107988 | plantCyc |
| xylan biosynthesis | 0.006107988 | plantCyc |
| cellulose synthase (UDP-forming) activity | 0.014866131 | GO:0016760 |
| dioxygenase activity | 0.024832496 | GO:0051213 |
| cellulose biosynthetic process | 0.037930888 | GO:0030244 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000256 | - | - |
| CRO_T014552 | AT2G46150 (5.00E-54) | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| CRO_T015299 | AT1G55850 (3.00E-122) | CSLE1|cellulose synthase like E1 |
| CRO_T029877 | AT4G25310 (2.00E-31) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T031214 | - | - |
| CRO_T033775 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000608 | S-methyl-5'-thioadenosine degradation I amino acid transmembrane transporter activity amino acid transmembrane transport hydroquinone glucosyltransferase activity S-methyl-5-thioribose kinase activity methylammonium transport methionine biosynthetic process nitrogen utilization negative regulation of flower development organic cation transport L-alpha-amino acid transmembrane transport L-amino acid transport phosphatidylethanolamine binding ammonium transmembrane transport | details |
Expression profiles
 Show details about module gene expression profiling |