TissueCFM000449's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Plant hormone signal transduction | 0.001037465 | KEGG pathway |
| Transcription_related, Transcription regulator: AUX/IAA | 0.003541648 | TF family |
| Cutin, suberine and wax biosynthesis | 0.006373082 | KEGG pathway |
| inorganic anion exchanger activity | 0.007386615 | GO:0005452 |
| chlorogenic acid biosynthesis I | 0.014112933 | plantCyc |
| chlorogenic acid biosynthesis II | 0.014112933 | plantCyc |
| amino acid transmembrane transporter activity | 0.019138625 | GO:0015171 |
| transition metal ion binding | 0.019138625 | GO:0046914 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 0.019138625 | GO:0016747 |
| regulation of intracellular pH | 0.019258498 | GO:0051453 |
| inorganic anion transport | 0.019258498 | GO:0015698 |
| anion transmembrane transport | 0.019258498 | GO:0098656 |
| Phenylpropanoid biosynthesis | 0.021998124 | KEGG pathway |
| metal ion transport | 0.027546802 | GO:0030001 |
| amino acid transmembrane transport | 0.027546802 | GO:0003333 |
| cellular transition metal ion homeostasis | 0.027546802 | GO:0046916 |
| regulation of cellular process | 0.032904991 | GO:0050794 |
| cellular process | 0.046419814 | GO:0009987 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002851 | AT1G77690 (0) | LAX3|like AUX1 3 |
| CRO_T010265 | AT2G37390 (2.00E-18) | NAKR2|SODIUM POTASSIUM ROOT DEFECTIVE 2 |
| CRO_T010913 | AT1G15460 (0) | ATBOR4|REQUIRES HIGH BORON 4 |
| CRO_T013624 | AT5G48930 (2.00E-34) | HCT|hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase |
| CRO_T018447 | AT5G65670 (2.00E-36) | IAA9|indole-3-acetic acid inducible 9 |
| CRO_T025005 | AT4G33790 (2.00E-23) | CER4|ECERIFERUM 4; FAR3|FATTY ACID REDUCTASE 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000036 | details | |
| TissueCFM000527 | Diterpenoid biosynthesis gibberellin 3-beta-dioxygenase activity gibberellin 20-oxidase activity ent-kaurene biosynthesis I gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) gibberellin biosynthesis III (early C-13 hydroxylation) regulation of meristem structural organization carpel development gibberellin biosynthetic process gibberellic acid mediated signaling pathway glucan endo-1,3-beta-D-glucosidase activity adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: HB cellular transition metal ion homeostasis response to light stimulus flower development unidimensional cell growth metal ion transport transition metal ion binding helicase activity polysaccharide binding | details |
Expression profiles
 Show details about module gene expression profiling |