TissueCFM000609's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| benzoate biosynthesis I (CoA-dependent, β-oxidative) | 0.00029366 | plantCyc |
| hydroquinone glucosyltransferase activity | 0.008581433 | GO:0050505 |
| isoflavonoid biosynthesis II | 0.009902268 | plantCyc |
| Plant-pathogen interaction | 0.017829704 | KEGG pathway |
| hydrolase activity | 0.023733248 | GO:0016787 |
| zinc ion transmembrane transporter activity | 0.032824123 | GO:0005385 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006225 | AT1G01420 (2.00E-155) | UGT72B3|UDP-glucosyl transferase 72B3 |
| CRO_T006778 | AT2G45600 (8.00E-27) | alpha/beta-Hydrolases superfamily protein |
| CRO_T008337 | AT5G47580 (2.00E-175) | ASG7|ALTERED SEED GERMINATION 7 |
| CRO_T018422 | - | - |
| CRO_T025164 | AT4G25434 (3.00E-87) | ATNUDT10|nudix hydrolase homolog 10 |
| CRO_T029722 | AT3G53990 (5.00E-21) | Adenine nucleotide alpha hydrolases-like superfamily protein |
| CRO_T030575 | AT3G48080 (1.00E-130) | alpha/beta-Hydrolases superfamily protein |
| CRO_T031044 | AT3G12750 (2.00E-74) | ZIP1|zinc transporter 1 precursor |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000608 | S-methyl-5'-thioadenosine degradation I amino acid transmembrane transporter activity amino acid transmembrane transport hydroquinone glucosyltransferase activity S-methyl-5-thioribose kinase activity methylammonium transport methionine biosynthetic process nitrogen utilization negative regulation of flower development organic cation transport L-alpha-amino acid transmembrane transport L-amino acid transport phosphatidylethanolamine binding ammonium transmembrane transport | details |
| TissueCFM001315 | Protein_kinases_phosphatases, PPC:4.2.5: Unknown Function Kinase Hedgehog signaling pathway - fly DNA methylation on cytosine glycerol metabolic process Transcription_related, Transcription factor: WRKY endoplasmic reticulum lumen developmental process glycerone kinase activity | details |
| TissueCFM001469 | Protein processing in endoplasmic reticulum xylogalacturonan biosynthesis glycerone kinase activity glycerol metabolic process developmental process response to UV-B endoplasmic reticulum lumen Ubiquitin_Proteasome_system, E3: U-box | details |
Expression profiles
 Show details about module gene expression profiling |