TissueCFM000646's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| cis-stilbene-oxide hydrolase activity | 0.007710803 | GO:0033961 |
| phosphate-containing compound metabolic process | 0.008951101 | GO:0006796 |
| regulation of transcription, DNA-templated | 0.008951101 | GO:0006355 |
| acylglycerol lipase activity | 0.011562786 | GO:0047372 |
| Transcription_related, Transcription factor: MIKC | 0.012746164 | TF family |
| inorganic diphosphatase activity | 0.012843743 | GO:0004427 |
| Transcription_related, Transcription factor: HB | 0.019840987 | TF family |
| Oxidative phosphorylation | 0.043012277 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000264 | AT1G13820 (6.00E-120) | alpha/beta-Hydrolases superfamily protein |
| CRO_T001410 | AT3G29170 (2.00E-25) | Eukaryotic protein of unknown function (DUF872) |
| CRO_T014762 | AT4G37940 (2.00E-36) | AGL21|AGAMOUS-like 21 |
| CRO_T026358 | AT3G05600 (7.00E-122) | alpha/beta-Hydrolases superfamily protein |
| CRO_T027692 | AT1G01050 (2.00E-97) | AtPPa1|pyrophosphorylase 1 |
| CRO_T031342 | AT1G23380 (3.00E-26) | KNAT6|KNOTTED1-like homeobox gene 6 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001701 | primary miRNA binding pre-miRNA binding tRNA (cytosine-5-)-methyltransferase activity exocyst assembly Golgi to plasma membrane transport generation of catalytic spliceosome for first transesterification step production of miRNAs involved in gene silencing by miRNA isoleucyl-tRNA aminoacylation isoleucine-tRNA ligase activity aminoacyl-tRNA editing activity inorganic diphosphatase activity production of siRNA involved in RNA interference phosphate-containing compound metabolic process regulation of translational fidelity tRNA methylation phloem or xylem histogenesis catalytic step 1 spliceosome prespliceosome post-mRNA release spliceosomal complex Prp19 complex mRNA processing exocyst catalytic step 2 spliceosome response to auxin | details |
Expression profiles
 Show details about module gene expression profiling |