TissueCFM000677's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T003503 | AT1G30700 (2.00E-11) | FAD-binding Berberine family protein |
| CRO_T006785 | - | - |
| CRO_T008882 | - | - |
| CRO_T018901 | - | - |
| CRO_T030162 | - | - |
| CRO_T030262 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000029 | details | |
| TissueCFM000313 | arginine biosynthetic process via ornithine urea cycle ornithine carbamoyltransferase activity L-citrulline degradation L-arginine biosynthesis I (via L-ornithine) L-arginine biosynthesis II (acetyl cycle) ornithine-citrulline shuttle | details |
| TissueCFM000406 | clathrin vesicle coat vesicle-mediated transport endomembrane system | details |
| TissueCFM000532 | details | |
| TissueCFM000676 | ornithine carbamoyltransferase activity arginine biosynthetic process via ornithine urea cycle L-citrulline degradation L-arginine biosynthesis I (via L-ornithine) L-arginine biosynthesis II (acetyl cycle) ornithine-citrulline shuttle clathrin vesicle coat Transcription_related, Transcription factor: FAR1 Biosynthesis of amino acids amino acid binding vesicle-mediated transport | details |
| TissueCFM000771 | Transcription_related, Transcription factor: Alfin-like post-embryonic root development MAPK signaling pathway - yeast PI3K-Akt signaling pathway Transcription_related, Transcription factor: M-type | details |
| TissueCFM000863 | details | |
| TissueCFM000890 | clathrin vesicle coat vesicle-mediated transport endomembrane system | details |
| TissueCFM001261 | post-embryonic root development MAPK signaling pathway - yeast protein domain specific binding calcium ion binding | details |
Expression profiles
 Show details about module gene expression profiling |