TissueCFM000731's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| NADH dehydrogenase (ubiquinone) activity | 9.32E-06 | GO:0008137 |
| Oxidative phosphorylation | 6.44E-05 | KEGG pathway |
| mitochondrion | 0.000147363 | GO:0005739 |
| Phagosome | 0.004250857 | KEGG pathway |
| cellular response to gravity | 0.012870819 | GO:0071258 |
| tubulin complex | 0.014658458 | GO:0045298 |
| response to cadmium ion | 0.023576983 | GO:0046686 |
| ATP synthesis coupled electron transport | 0.027820516 | GO:0042773 |
| microtubule-based process | 0.027820516 | GO:0007017 |
| ATP hydrolysis coupled proton transport | 0.028228084 | GO:0015991 |
| ATP synthesis coupled proton transport | 0.031328888 | GO:0015986 |
| structural constituent of cytoskeleton | 0.035285105 | GO:0005200 |
| proton-transporting ATP synthase activity, rotational mechanism | 0.035285105 | GO:0046933 |
| proton-transporting ATPase activity, rotational mechanism | 0.035285105 | GO:0046961 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002067 | ATMG00180 (2.00E-66) | CCB452|cytochrome C biogenesis 452 |
| CRO_T004823 | AT1G04820 (0) | TOR2|TORTIFOLIA 2; TUA4|tubulin alpha-4 chain |
| CRO_T008597 | ATMG01190 (5.00E-18) | ATP1|ATP synthase subunit 1 |
| CRO_T009797 | - | - |
| CRO_T010881 | ATMG00650 (1.00E-14) | NAD4L|NADH dehydrogenase subunit 4L |
| CRO_T014274 | AT2G07776 (6.00E-15) | unknown protein |
| CRO_T014733 | ATMG00070 (3.00E-82) | NAD9|NADH dehydrogenase subunit 9 |
| CRO_T029615 | ATMG00070 (9.00E-77) | NAD9|NADH dehydrogenase subunit 9 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000407 | Oxidative phosphorylation Transcription_related, Transcription factor: C2C2-Dof proton-transporting ATP synthase complex, coupling factor F(o) hydrogen ion transmembrane transporter activity mitochondrion NADH dehydrogenase (ubiquinone) activity ATP synthesis coupled proton transport mitochondrial inner membrane | details |
| TissueCFM001267 | Phagosome cellular response to gravity Arginine and proline metabolism tubulin complex response to cadmium ion microtubule-based process cellular protein metabolic process Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase Transcription_related, Transcription factor: Trihelix | details |
| TissueCFM001664 | Other types of O-glycan biosynthesis Phagosome formation of glycosidic bonds, GlycosylTransferases: GTnc Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase Transcription_related, Transcription factor: zf-HD D-myo-inositol (1,4,5)-trisphosphate degradation cAMP-dependent protein kinase activity tubulin complex cellular response to gravity glycolysis I (from glucose 6-phosphate) response to cadmium ion phosphatidylinositol dephosphorylation microtubule-based process cell surface receptor signaling pathway | details |
| TissueCFM001822 | plasmodesma Phagosome plasma membrane tubulin complex Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase Transcription_related, Transcription regulator: SWI/SNF-BAF60b cAMP-dependent protein kinase activity cellular response to gravity regulation of mitotic cell cycle response to cadmium ion glycerol transport regulation of cyclin-dependent protein serine/threonine kinase activity animal organ development microtubule-based process cellular water homeostasis water transport cell surface receptor signaling pathway ion transmembrane transport glycerol channel activity calcium-dependent phospholipid binding water channel activity structural constituent of cytoskeleton translational initiation | details |
Expression profiles
 Show details about module gene expression profiling |