TissueCFM000736's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| glutamate metabolic process | 0.006432842 | GO:0006536 |
| cortical microtubule organization | 0.006432842 | GO:0043622 |
| microtubule severing | 0.006432842 | GO:0051013 |
| plant-type cell wall biogenesis | 0.006432842 | GO:0009832 |
| trichome branching | 0.006432842 | GO:0010091 |
| L-glutamate degradation IV | 0.006909786 | plantCyc |
| Butanoate metabolism | 0.007971652 | KEGG pathway |
| ajmaline and sarpagine biosynthesis | 0.008492422 | plantCyc |
| multidimensional cell growth | 0.010713484 | GO:0009825 |
| Transcription_related, Transcription factor: bHLH | 0.014279181 | TF family |
| MAPK signaling pathway - plant | 0.029024985 | KEGG pathway |
| glutamate decarboxylase activity | 0.04061079 | GO:0004351 |
| microtubule-severing ATPase activity | 0.049587756 | GO:0008568 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006020 | AT1G53270 (1.00E-24) | ABCG10|ATP-binding cassette G10 |
| CRO_T014219 | AT5G47950 (1.00E-43) | HXXXD-type acyl-transferase family protein |
| CRO_T019211 | AT1G80350 (4.00E-34) | BOT1|BOTERO 1; ERH3|ECTOPIC ROOT HAIR 3; FRA2|FRAGILE FIBER 2; FRC2|FURCA2; FTR|FAT ROOT; KTN1|KATANIN 1 |
| CRO_T022448 | AT5G17330 (0) | GAD|glutamate decarboxylase; GAD1|GLUTAMATE DECARBOXYLASE 1 |
| CRO_T022827 | AT4G00870 (9.00E-24) | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| CRO_T029451 | AT3G47580 (1.00E-89) | Leucine-rich repeat protein kinase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000120 | oxidation-reduction process oxylipin biosynthetic process traumatin and (Z)-3-hexen-1-yl acetate biosynthesis 2-Oxocarboxylic acid metabolism Linoleic acid metabolism fatty acid biosynthetic process glutamate metabolic process Butanoate metabolism Sesquiterpenoid and triterpenoid biosynthesis L-glutamate degradation IV glutamate decarboxylase activity L-tryptophan biosynthesis Cytochrome_P450, Cytochrome P450: CYP74B Cytochrome_P450, Cytochrome P450: CYP79B Cytochrome_P450, Cytochrome P450: CYP94C oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen pyridoxal phosphate binding jasmonic acid biosynthesis Transcription_related, Transcription factor: Tify | details |
| TissueCFM000301 | ajmaline and sarpagine biosynthesis Protein_kinases_phosphatases, PPC:1.11.1: Legume Lectin Domain Kinase Glycerophospholipid metabolism MAPK signaling pathway - plant Transcription_related, Transcription factor: bHLH | details |
Expression profiles
 Show details about module gene expression profiling |