TissueCFM000811's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| oxidation-reduction process | 0.00019758 | GO:0055114 |
| hydrogen peroxide catabolic process | 0.00019758 | GO:0042744 |
| cellular oxidant detoxification | 0.000331526 | GO:0098869 |
| response to oxidative stress | 0.000331526 | GO:0006979 |
| Phenylpropanoid biosynthesis | 0.000767499 | KEGG pathway |
| peroxidase activity | 0.001700869 | GO:0004601 |
| extracellular region | 0.002067228 | GO:0005576 |
| L-iditol 2-dehydrogenase activity | 0.005782675 | GO:0003939 |
| gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) | 0.006373082 | plantCyc |
| gibberellin biosynthesis III (early C-13 hydroxylation) | 0.006373082 | plantCyc |
| D-arabinono-1,4-lactone oxidase activity | 0.007707385 | GO:0003885 |
| heme binding | 0.007707385 | GO:0020037 |
| plant-type cell wall organization | 0.014941731 | GO:0009664 |
| Pentose and glucuronate interconversions | 0.025357101 | KEGG pathway |
| membrane | 0.027784192 | GO:0016020 |
| plant-type cell wall | 0.027784192 | GO:0009505 |
| metal ion binding | 0.029160162 | GO:0046872 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000492 | AT1G05260 (8.00E-95) | RCI3|RARE COLD INDUCIBLE GENE 3 |
| CRO_T003984 | AT1G32300 (0) | GulLO1|L -gulono-1,4-lactone ( L -GulL) oxidase 1 |
| CRO_T013378 | AT4G01140 (2.00E-36) | Protein of unknown function (DUF1191) |
| CRO_T027228 | AT5G05340 (4.00E-48) | PRX52|peroxidase 52 |
| CRO_T030254 | AT1G52810 (6.00E-40) | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| CRO_T031753 | AT5G63620 (3.00E-24) | GroES-like zinc-binding alcohol dehydrogenase family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000345 | Transcription_related, Transcription factor: OFP Stilbenoid, diarylheptanoid and gingerol biosynthesis benzoate biosynthesis I (CoA-dependent, β-oxidative) D-arabinono-1,4-lactone oxidase activity hydrolase activity O-methyltransferase activity membrane aromatic compound biosynthetic process | details |
| TissueCFM000467 | Transcription_related, Transcription factor: NF-YC Phenylpropanoid biosynthesis | details |
| TissueCFM000957 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc Transcription_related, Transcription factor: NF-YC formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: WRKY chitinase activity chitin binding cell wall macromolecule catabolic process Amino sugar and nucleotide sugar metabolism Phenylpropanoid biosynthesis chitin catabolic process transition metal ion binding | details |
| TissueCFM000958 | Phenylpropanoid biosynthesis Transcription_related, Transcription factor: NF-YC formation of glycosidic bonds, GlycosylTransferases: GTnc single-organism biosynthetic process organic substance biosynthetic process gibberellin biosynthesis I (non C-3, non C-13 hydroxylation) gibberellin biosynthesis III (early C-13 hydroxylation) superpathway of scopolin and esculin biosynthesis phenylpropanoids methylation (ice plant) suberin monomers biosynthesis aromatic compound biosynthetic process D-arabinono-1,4-lactone oxidase activity | details |
Expression profiles
 Show details about module gene expression profiling |