TissueCFM000873's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.003789779 | cazy family |
| non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 | 0.003789779 | cazy family |
| Protein_kinases_phosphatases, PPC:1.16.1: Receptor Like Cytoplasmic Kinase II | 0.003789779 | kinase family |
| cytokinins degradation | 0.004649031 | plantCyc |
| stachyose biosynthesis | 0.004649031 | plantCyc |
| regulation of sequestering of zinc ion | 0.013675424 | GO:0061088 |
| response to zinc ion | 0.013675424 | GO:0010043 |
| Galactose metabolism | 0.023243179 | KEGG pathway |
| Zeatin biosynthesis | 0.023243179 | KEGG pathway |
| zinc II ion transmembrane transport | 0.023269971 | GO:0071577 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002524 | AT2G41510 (1.00E-107) | ATCKX1|CYTOKININ OXIDASE/DEHYDROGENASE 1 |
| CRO_T006722 | AT5G59100 (5.00E-131) | Subtilisin-like serine endopeptidase family protein |
| CRO_T020034 | AT2G46800 (1.00E-67) | ATCDF1|A. THALIANA CATION DIFFUSION FACILITATOR 1; MTP1|metal tolerance protein 1; OZS1|OVERLY ZINC SENSITIVE 1; ZAT|zinc transporter of Arabidopsis thaliana; ZAT1|ZINC TRANSPORTER OF 1 |
| CRO_T022600 | AT1G63500 (0) | BSK7|brassinosteroid-signaling kinase 7 |
| CRO_T025711 | AT4G24430 (3.00E-54) | Rhamnogalacturonate lyase family protein |
| CRO_T026430 | AT4G01970 (0) | AtSTS|stachyose synthase; RS4|raffinose synthase 4 |
| CRO_T032614 | AT2G26180 (2.00E-15) | IQD6|IQ-domain 6 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000199 | Protein_kinases_phosphatases, PPC:2.1.4: GmPK6/AtMRK1 Family | details |
| TissueCFM000275 | magnoflorine biosynthesis Lysosome clathrin adaptor complex | details |
| TissueCFM000644 | sphingolipid biosynthesis (plants) Sphingolipid metabolism response to zinc ion regulation of programmed cell death regulation of sequestering of zinc ion Transcription_related, Transcription factor: G2-like Transcription_related, Transcription factor: Orphans cell growth zinc II ion transmembrane transport phosphorelay signal transduction system biosynthetic process Plant hormone signal transduction | details |
| TissueCFM000922 | integral component of membrane xylan biosynthesis cellulose synthase (UDP-forming) activity zinc ion transmembrane transporter activity magnesium ion transmembrane transporter activity regulation of sequestering of zinc ion magnesium ion transmembrane transport magnesium ion transport response to zinc ion zinc II ion transmembrane transport cellulose biosynthetic process vacuole RNA transport | details |
| TissueCFM000986 | Base excision repair non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 Transcription_related, Transcription factor: LOB DNA-3-methyladenine glycosylase activity base-excision repair lyase activity | details |
| TissueCFM001318 | Protein_kinases_phosphatases, PPC:1.16.1: Receptor Like Cytoplasmic Kinase II Transcription_related, Transcription factor: BES1 formation of glycosidic bonds, GlycosylTransferases: GTnc Transcription_related, Transcription factor: B3 cullin deneddylation Golgi vesicle transport brassinosteroid mediated signaling pathway vesicle docking vesicle fusion protein glycosylation Plant hormone signal transduction SNARE binding galactosyltransferase activity SNAP receptor activity proteasome complex | details |
| TissueCFM001337 | cytokinins degradation Protein_kinases_phosphatases, PPC:1.16.1: Receptor Like Cytoplasmic Kinase II Transcription_related, Transcription regulator: HMG Zeatin biosynthesis carbohydrate transport Plant hormone signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |