TissueCFM000968's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 0.005213151 | GO:0004801 |
| pentose phosphate pathway (non-oxidative branch) | 0.005847606 | plantCyc |
| EKC/KEOPS complex | 0.006072695 | GO:0000408 |
| tRNA threonylcarbamoyladenosine modification | 0.007819149 | GO:0002949 |
| Rubisco shunt | 0.009021865 | plantCyc |
| pentose-phosphate shunt | 0.018229857 | GO:0006098 |
| cytoplasmic translation | 0.024281347 | GO:0002181 |
| transferase activity, transferring acyl groups other than amino-acyl groups | 0.045014045 | GO:0016747 |
| metalloendopeptidase activity | 0.045014045 | GO:0004222 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T008122 | AT1G02610 (7.00E-07) | RING/FYVE/PHD zinc finger superfamily protein |
| CRO_T008641 | AT1G62914 (4.00E-28) | pentatricopeptide (PPR) repeat-containing protein |
| CRO_T010358 | AT2G45270 (5.00E-155) | GCP1|glycoprotease 1 |
| CRO_T014487 | AT5G13420 (0) | TRA2|transaldolase 2 |
| CRO_T015892 | AT1G05190 (7.00E-94) | emb2394|embryo defective 2394 |
| CRO_T025124 | AT1G14780 (2.00E-137) | MAC/Perforin domain-containing protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001112 | floral organ morphogenesis gibberellin mediated signaling pathway positive regulation of gibberellic acid mediated signaling pathway trans-lycopene biosynthesis II (plants) benzoate biosynthesis I (CoA-dependent, β-oxidative) Carotenoid biosynthesis Plant hormone signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |