TissueCFM000999's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| L-phenylalanine biosynthesis II | 0.003898116 | plantCyc |
| L-tyrosine biosynthesis II | 0.003898116 | plantCyc |
| UDP-D-xylose biosynthesis | 0.003898116 | plantCyc |
| L-serine transmembrane transporter activity | 0.005362682 | GO:0015194 |
| chorismate mutase activity | 0.005362682 | GO:0004106 |
| C-19 gibberellin 2-beta-dioxygenase activity | 0.005362682 | GO:0052634 |
| L-serine transport | 0.006424245 | GO:0015825 |
| gibberellin catabolic process | 0.006424245 | GO:0045487 |
| chorismate metabolic process | 0.006424245 | GO:0046417 |
| Ubiquitin_Proteasome_system, E2: UBC | 0.007249122 | ubs family |
| aromatic amino acid family biosynthetic process | 0.011557661 | GO:0009073 |
| response to light stimulus | 0.018475868 | GO:0009416 |
| ubiquitin protein ligase binding | 0.029692601 | GO:0031625 |
| Amino sugar and nucleotide sugar metabolism | 0.034489578 | KEGG pathway |
| Biosynthesis of amino acids | 0.034489578 | KEGG pathway |
| Diterpenoid biosynthesis | 0.034489578 | KEGG pathway |
| Ubiquitin mediated proteolysis | 0.034489578 | KEGG pathway |
| ubiquitin-dependent protein catabolic process | 0.041572895 | GO:0006511 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001416 | AT3G29200 (4.00E-103) | ATCM1|CHORISMATE MUTASE 1 |
| CRO_T010788 | AT1G80330 (8.00E-39) | ATGA3OX4|GIBBERELLIN 3-OXIDASE 4 |
| CRO_T016236 | AT5G28840 (6.00E-25) | GME|GDP-D-mannose 3',5'-epimerase |
| CRO_T022966 | AT3G06170 (1.00E-160) | Serinc-domain containing serine and sphingolipid biosynthesis protein |
| CRO_T024664 | AT1G63800 (1.00E-35) | UBC5|ubiquitin-conjugating enzyme 5 |
| CRO_T031639 | AT1G74450 (1.00E-98) | Protein of unknown function (DUF793) |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001196 | UDP-D-xylose biosynthesis L-serine transport Ubiquitin_Proteasome_system, E2: UBC L-serine transmembrane transporter activity anchored component of membrane pollen tube Amino sugar and nucleotide sugar metabolism Plant-pathogen interaction Ubiquitin mediated proteolysis integral component of membrane ubiquitin-dependent protein catabolic process ubiquitin protein ligase binding | details |
Expression profiles
 Show details about module gene expression profiling |