TissueCFM001006's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:5.1.1: Other Kinase | 0.008096328 | kinase family |
| protein serine/threonine kinase activity | 0.011533379 | GO:0004674 |
| Protein_kinases_phosphatases, PPC:1.3.1: Receptor-like protein kinase | 0.018197904 | kinase family |
| Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase | 0.022217247 | kinase family |
| U4/U6 x U5 tri-snRNP complex | 0.026295574 | GO:0046540 |
| protein phosphorylation | 0.026707959 | GO:0006468 |
| Spliceosome | 0.029426413 | KEGG pathway |
| mRNA splicing, via spliceosome | 0.036076941 | GO:0000398 |
| intracellular signal transduction | 0.043556117 | GO:0035556 |
| Transcription_related, Transcription factor: MYB | 0.045752857 | TF family |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001855 | AT5G20200 (1.00E-17) | nucleoporin-related |
| CRO_T012149 | AT5G14270 (2.00E-113) | ATBET9|bromodomain and extraterminal domain protein 9 |
| CRO_T017930 | AT1G28060 (2.00E-177) | Pre-mRNA-splicing factor 3 |
| CRO_T020492 | AT3G13225 (5.00E-18) | WW domain-containing protein |
| CRO_T020966 | AT2G44430 (5.00E-53) | DNA-binding bromodomain-containing protein |
| CRO_T024659 | AT5G47750 (2.00E-158) | D6PKL2|D6 protein kinase like 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001796 | protein serine/threonine kinase activity protein phosphorylation ATP binding Protein_kinases_phosphatases, PPC:5.1.1: Other Kinase U4/U6 x U5 tri-snRNP complex Protein_kinases_phosphatases, PPC:1.3.1: Receptor-like protein kinase Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase Protein_kinases_phosphatases, PPC:4.5.2: CDC2 Like Kinase Family Spliceosome mRNA splicing, via spliceosome intracellular signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |