TissueCFM001123's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| salicylate glucosides biosynthesis II | 0.005199793 | plantCyc |
| transmembrane transport | 0.013476545 | GO:0055085 |
| organic phosphonate transport | 0.013476545 | GO:0015716 |
| organophosphate ester transport | 0.013476545 | GO:0015748 |
| Transcription_related, Transcription factor: NAC | 0.01736409 | TF family |
| quercetin glucoside biosynthesis (Allium) | 0.020093012 | plantCyc |
| quercetin gentiotetraside biosynthesis | 0.020275498 | plantCyc |
| oxidoreductase activity, acting on the CH-CH group of donors | 0.032137133 | GO:0016627 |
| organic phosphonate transmembrane-transporting ATPase activity | 0.032137133 | GO:0015416 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001821 | AT1G01720 (2.00E-46) | ANAC002|Arabidopsis NAC domain containing protein 2 |
| CRO_T007788 | AT1G18180 (3.00E-104) | Protein of unknown function (DUF1295) |
| CRO_T008646 | AT1G15210 (0) | ABCG35|ATP-binding cassette G35; ATPDR7|PLEIOTROPIC DRUG RESISTANCE 7 |
| CRO_T021028 | - | - |
| CRO_T026813 | AT3G14470 (2.00E-43) | NB-ARC domain-containing disease resistance protein |
| CRO_T030412 | AT2G39435 (8.00E-21) | TRM18|TON1 Recruiting Motif 18 |
| CRO_T031439 | AT1G30900 (0) | BP80-3; 3|binding protein of 80 kDa 3; 3; VSR3; 3|VACUOLAR SORTING RECEPTOR 3; 3; VSR6|VACUOLAR SORTING RECEPTOR 6 |
| CRO_T033472 | AT1G66950 (1.00E-116) | ABCG39|ATP-binding cassette G39; ATPDR11|PLEIOTROPIC DRUG RESISTANCE 11 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000040 | Transcription_related, Transcription factor: Alfin-like | details |
| TissueCFM000041 | details | |
| TissueCFM000285 | oxidoreductase activity, acting on the CH-CH group of donors isomerase activity lipid metabolic process | details |
| TissueCFM000432 | response to biotic stimulus defense response benzoate biosynthesis I (CoA-dependent, β-oxidative) Transcription_related, Transcription factor: MYB-related Transcription_related, Transcription factor: bHLH | details |
| TissueCFM000507 | meristem maintenance adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 Protein_kinases_phosphatases, PPC:1.6.4: RKF3 Like Kinase NF-kappa B signaling pathway anion transmembrane transport protein phosphorylation triacylglycerol degradation Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase defense response Transcription_related, Transcription factor: HB Transcription_related, Transcription factor: NAC | details |
| TissueCFM001534 | transmembrane receptor protein serine/threonine kinase binding salicylate glucosides biosynthesis II cellulose biosynthesis xyloglucan biosynthesis quercetin glucoside biosynthesis (Allium) organic phosphonate transport organophosphate ester transport recognition of pollen quercetin gentiotetraside biosynthesis organic phosphonate transmembrane-transporting ATPase activity | details |
Expression profiles
 Show details about module gene expression profiling |