TissueCFM001278's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| protein O-linked glycosylation via hydroxyproline | 0.002361673 | GO:0018258 |
| arabinogalactan protein metabolic process | 0.002361673 | GO:0010405 |
| DNA unwinding involved in DNA replication | 0.003935075 | GO:0006268 |
| chromosome segregation | 0.004720835 | GO:0007059 |
| DNA topological change | 0.005191537 | GO:0006265 |
| galactosylxylosylprotein 3-beta-galactosyltransferase activity | 0.00608174 | GO:0047220 |
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.008246648 | cazy family |
| DNA topoisomerase type II (ATP-hydrolyzing) activity | 0.012157011 | GO:0003918 |
| DNA topoisomerase complex (ATP-hydrolyzing) | 0.021196819 | GO:0009330 |
| nucleoid | 0.021196819 | GO:0009295 |
| chromosome | 0.042314784 | GO:0005694 |
| mediator complex | 0.042314784 | GO:0016592 |
| Amino sugar and nucleotide sugar metabolism | 0.049861401 | KEGG pathway |
| Plant hormone signal transduction | 0.049861401 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000953 | AT5G15980 (2.00E-152) | Pentatricopeptide repeat (PPR) superfamily protein |
| CRO_T008218 | AT1G49890 (3.00E-84) | QWRF2|QWRF domain containing 2 |
| CRO_T013836 | AT1G27120 (0) | Galactosyltransferase family protein |
| CRO_T014827 | AT3G10690 (3.00E-04) | GYRA|DNA GYRASE A |
| CRO_T028465 | - | - |
| CRO_T030087 | AT1G67040 (9.00E-13) | TRM22|TON1 Recruiting Motif 22 |
| CRO_T030756 | AT5G10440 (8.00E-25) | CYCD4; 2|cyclin d4; 2 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001279 | biotin-carboxyl carrier protein assembly fatty acid biosynthesis initiation I DNA unwinding involved in DNA replication chromosome segregation DNA topological change octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) biotin carboxylase activity DNA topoisomerase type II (ATP-hydrolyzing) activity nucleoid DNA topoisomerase complex (ATP-hydrolyzing) cytosolic ribosome chloroplast mediator complex chromosome | details |
Expression profiles
 Show details about module gene expression profiling |