TissueCFM001417's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase | 0.004546929 | kinase family |
| Transcription_related, Transcription factor: C2C2-YABBY | 0.004546929 | TF family |
| Transcription_related, Transcription regulator: SWI/SNF-BAF60b | 0.004546929 | TF family |
| receptor signaling protein serine/threonine kinase activity | 0.015911428 | GO:0004702 |
| translational initiation | 0.03114121 | GO:0006413 |
| multicellular organism development | 0.03114121 | GO:0007275 |
| translation initiation factor activity | 0.04407398 | GO:0003743 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T012272 | AT1G08465 (1.00E-28) | YAB2|YABBY2 |
| CRO_T014466 | AT1G71350 (0) | eukaryotic translation initiation factor SUI1 family protein |
| CRO_T017410 | AT5G10310 (3.00E-19) | unknown protein |
| CRO_T022651 | AT3G58770 (2.00E-11) | unknown protein |
| CRO_T030309 | - | - |
| CRO_T031472 | - | - |
| CRO_T033821 | AT4G14480 (6.00E-49) | Protein kinase superfamily protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001046 | mannose-1-phosphate guanylyltransferase (GDP) activity Transcription_related, Transcription regulator: SWI/SNF-BAF60b GDP-mannose biosynthesis L-ascorbate biosynthesis I (L-galactose pathway) Fructose and mannose metabolism Inositol phosphate metabolism phospholipases water channel activity glycerol channel activity Transcription_related, Transcription factor: MYB cellular water homeostasis water transport glycerol transport hydrolase activity, acting on ester bonds translation initiation factor activity biosynthetic process translational initiation ion transmembrane transport | details |
| TissueCFM001104 | glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity sphingomyelin phosphodiesterase D activity pectic galactan metabolic process single organismal cell-cell adhesion calcium ion transport formation of glycosidic bonds, GlycosylTransferases: GTnc heparan sulfate proteoglycan biosynthetic process glycosaminoglycan biosynthetic process glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity cation transmembrane transporter activity Protein_kinases_phosphatases, PPC:1.9.1: CRPK1 Like Kinase (Types 1 and 2) cation transmembrane transport phloem or xylem histogenesis cellular transition metal ion homeostasis metal ion transport transition metal ion binding response to abscisic acid | details |
| TissueCFM001292 | adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 cellulose catabolic process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc cellulase activity Fatty acid elongation guard cell differentiation L-gulonolactone oxidase activity D-arabinono-1,4-lactone oxidase activity membrane | details |
| TissueCFM001354 | Transcription_related, Transcription factor: BBR-BPC Transcription_related, Transcription regulator: SWI/SNF-BAF60b replication fork Rad51B-Rad51C-Rad51D-XRCC2 complex strand invasion regulation of cyclin-dependent protein serine/threonine kinase activity mitotic recombination regulation of mitotic cell cycle reciprocal meiotic recombination response to ionizing radiation meiotic DNA recombinase assembly Homologous recombination cellular water homeostasis water transport glycerol transport recombinase activity endodeoxyribonuclease activity four-way junction DNA binding water channel activity DNA-dependent ATPase activity glycerol channel activity single-stranded DNA binding double-stranded DNA binding ion transmembrane transport translational initiation translation initiation factor activity | details |
| TissueCFM001814 | Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase Protein_kinases_phosphatases, PPC:4.1.2: STE20-PAK Like Protein Kinase Transcription_related, Transcription regulator: SWI/SNF-BAF60b cAMP-dependent protein kinase activity protein phosphorylation regulation of cyclin-dependent protein serine/threonine kinase activity cellular water homeostasis regulation of mitotic cell cycle glycerol transport water transport cell surface receptor signaling pathway ion transmembrane transport Transcription_related, Transcription factor: Orphans water channel activity receptor signaling protein serine/threonine kinase activity glycerol channel activity translational initiation | details |
| TissueCFM001822 | plasmodesma Phagosome plasma membrane tubulin complex Protein_kinases_phosphatases, PPC:1.5.1: Wall Associated Kinase-like Kinase Transcription_related, Transcription regulator: SWI/SNF-BAF60b cAMP-dependent protein kinase activity cellular response to gravity regulation of mitotic cell cycle response to cadmium ion glycerol transport regulation of cyclin-dependent protein serine/threonine kinase activity animal organ development microtubule-based process cellular water homeostasis water transport cell surface receptor signaling pathway ion transmembrane transport glycerol channel activity calcium-dependent phospholipid binding water channel activity structural constituent of cytoskeleton translational initiation | details |
Expression profiles
 Show details about module gene expression profiling |