TissueCFM001431's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Leishmaniasis | 0.001950499 | KEGG pathway |
| Calcium signaling pathway | 0.007793928 | KEGG pathway |
| proteasome core complex | 0.008121675 | GO:0005839 |
| mitochondrial outer membrane | 0.008121675 | GO:0005741 |
| cell adhesion | 0.010424761 | GO:0007155 |
| regulation of anion transmembrane transport | 0.013887363 | GO:1903959 |
| anion transport | 0.013887363 | GO:0006820 |
| Proteasome | 0.014905288 | KEGG pathway |
| voltage-gated anion channel activity | 0.023447049 | GO:0008308 |
| threonine-type endopeptidase activity | 0.024731382 | GO:0004298 |
| Ubiquitin_Proteasome_system, E3 adaptor: DWD | 0.035293061 | ubs family |
| metalloendopeptidase activity | 0.036384367 | GO:0004222 |
| ubiquitin-dependent protein catabolic process | 0.04216016 | GO:0006511 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T002214 | AT1G65920 (0) | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| CRO_T006850 | AT2G46560 (0) | transducin family protein / WD-40 repeat family protein |
| CRO_T009502 | AT1G05910 (1.00E-79) | cell division cycle protein 48-related / CDC48-related |
| CRO_T015339 | AT5G15090 (3.00E-70) | ATVDAC3|VOLTAGE DEPENDENT ANION CHANNEL 3 |
| CRO_T026152 | AT4G31300 (3.00E-18) | PBA1|N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
| CRO_T027085 | AT5G42620 (7.00E-120) | metalloendopeptidases; zinc ion binding |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000200 | details | |
| TissueCFM000790 | formation of glycosidic bonds, GlycosylTransferases: GTnc Calcium signaling pathway voltage-gated anion channel activity threonine-type endopeptidase activity mitochondrial outer membrane proteasome core complex Proteasome regulation of anion transmembrane transport anion transport | details |
| TissueCFM000997 | eukaryotic translation initiation factor 2 complex multi-eIF complex mitochondrial translation aminoacyl-tRNA hydrolase activity eukaryotic translation initiation factor 2B complex ribosome binding translational initiation eukaryotic 48S preinitiation complex translation initiation factor activity RNA transport Ubiquitin_Proteasome_system, E3 adaptor: DWD | details |
| TissueCFM001199 | D-myo-inositol (1,4,5)-trisphosphate degradation Transcription_related, Transcription factor: SBP Transcription_related, Transcription regulator: GNAT peptide-serine-N-acetyltransferase activity peptide-glutamate-N-acetyltransferase activity long-day photoperiodism N-terminal peptidyl-serine acetylation N-terminal peptidyl-glutamic acid acetylation stem cell fate determination internal protein amino acid acetylation meristem maintenance cellular calcium ion homeostasis nuclear-transcribed mRNA catabolic process, nonsense-mediated decay pollen maturation NatA complex sugar mediated signaling pathway phosphatidylinositol dephosphorylation cellular response to phosphate starvation pollen germination response to wounding nucleic acid metabolic process cellular macromolecule metabolic process cation transmembrane transport salicylic acid mediated signaling pathway jasmonic acid mediated signaling pathway cation-transporting ATPase activity | details |
| TissueCFM001367 | Calcium signaling pathway Regulation of actin cytoskeleton Set1C/COMPASS complex mitochondrial outer membrane myosin complex regulation of anion transmembrane transport anion transport vegetative to reproductive phase transition of meristem voltage-gated anion channel activity histone binding motor activity actin binding Transcription_related, Transcription factor: HB | details |
| TissueCFM001843 | Calcium signaling pathway mitochondrial outer membrane anion transport regulation of anion transmembrane transport hydrolase activity, acting on acid anhydrides voltage-gated anion channel activity | details |
Expression profiles
 Show details about module gene expression profiling |