TissueCFM001514's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| RNA degradation | 0.015210399 | KEGG pathway |
| adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 | 0.015495453 | cazy family |
| hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc | 0.015495453 | cazy family |
| Transcription_related, Transcription factor: MYB-related | 0.015495453 | TF family |
| cellulose catabolic process | 0.022718524 | GO:0030245 |
| cellulase activity | 0.026689806 | GO:0008810 |
| cysteine-type endopeptidase activity | 0.026689806 | GO:0004197 |
| nucleotidyltransferase activity | 0.026689806 | GO:0016779 |
| hydrolase activity, acting on ester bonds | 0.035827652 | GO:0016788 |
| extracellular space | 0.036071351 | GO:0005615 |
| plant-type vacuole membrane | 0.036071351 | GO:0009705 |
| Lysosome | 0.036071351 | KEGG pathway |
| proteolysis involved in cellular protein catabolic process | 0.036208154 | GO:0051603 |
| methyltransferase activity | 0.045432327 | GO:0008168 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T012591 | AT5G58900 (2.00E-28) | Homeodomain-like transcriptional regulator |
| CRO_T014139 | AT4G00060 (2.00E-18) | MEE44|maternal effect embryo arrest 44 |
| CRO_T022920 | AT1G47128 (4.00E-114) | RD21|responsive to dehydration 21; RD21A|responsive to dehydration 21A |
| CRO_T025114 | AT5G03980 (4.00E-26) | SGNH hydrolase-type esterase superfamily protein |
| CRO_T028028 | AT1G58120 (8.00E-14) | |
| CRO_T031554 | AT3G21550 (2.00E-59) | AtDMP2|DUF679 domain membrane protein 2 |
| CRO_T033316 | AT2G32990 (0) | AtGH9B8|glycosyl hydrolase 9B8 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM000757 | pectin catabolic process non-hydrolytic cleavage of glycosidic bonds, Polysaccharide Lyases: PL4 Transcription_related, Transcription factor: MYB-related nucleotidyltransferase activity pectate lyase activity glycolysis I (from glucose 6-phosphate) triacylglycerol degradation Pentose and glucuronate interconversions RNA degradation | details |
| TissueCFM001389 | condensed nuclear chromosome kinetochore Ndc80 complex establishment of mitotic spindle orientation attachment of mitotic spindle microtubules to kinetochore mitotic spindle organization Fatty acid elongation Lysosome Transcription_related, Transcription factor: MYB-related Transcription_related, Transcription regulator: GNAT homogalacturonan degradation very long chain fatty acid biosynthesis I N-acetyltransferase activity structural constituent of cytoskeleton transmembrane transporter activity | details |
| TissueCFM001764 | Lipopolysaccharide biosynthesis CMP-3-deoxy-D-manno-octulosonate biosynthesis adhesion to carbohydrates, Carbohydrate-Binding Modules: CBM57 hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc homogalacturonan degradation intracellular ribonucleoprotein complex | details |
Expression profiles
 Show details about module gene expression profiling |