TissueCFM001643's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Carbohydrate digestion and absorption | 0.001241171 | KEGG pathway |
| negative regulation of GTPase activity | 0.002275481 | GO:0034260 |
| Protein_kinases_phosphatases, PPC:5.1.1: Other Kinase | 0.002481903 | kinase family |
| channel regulator activity | 0.006058919 | GO:0016247 |
| GTPase inhibitor activity | 0.006058919 | GO:0005095 |
| G-protein coupled receptor signaling pathway | 0.006252581 | GO:0007186 |
| G-protein beta/gamma-subunit complex binding | 0.010095513 | GO:0031683 |
| Ubiquitin_Proteasome_system, E2: UBC | 0.012678098 | ubs family |
| signal transducer activity | 0.036282678 | GO:0004871 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000038 | AT1G72320 (0) | APUM23|pumilio 23 |
| CRO_T001825 | AT2G26300 (2.00E-173) | ATGPA1|G PROTEIN ALPHA SUBUNIT 1 |
| CRO_T004395 | - | - |
| CRO_T004628 | AT1G14570 (7.00E-133) | PUX7|plant UBX domain-containing protein 7 |
| CRO_T015039 | - | - |
| CRO_T028792 | AT5G08160 (3.00E-56) | ATPK3|serine/threonine protein kinase 3 |
| CRO_T030714 | AT3G15000 (1.00E-71) | MORF8|multiple organellar RNA editing factor 8; RIP1|RNA-editing factor interacting protein 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001383 | actin filament polymerization Group II intron splicing N-terminal peptidyl-glycine N-myristoylation regulation of vesicle targeting, to, from or within Golgi Arp2/3 complex-mediated actin nucleation DNA topological change translational termination cis-Golgi network cytoplasm Golgi medial cisterna Arp2/3 protein complex cytochrome complex assembly intra-Golgi vesicle-mediated transport ajmaline and sarpagine biosynthesis Flavonoid biosynthesis flavonoid biosynthesis (in equisetum) leucodelphinidin biosynthesis pinobanksin biosynthesis sesaminol glucoside biosynthesis | details |
| TissueCFM001662 | Spliceosome mRNA 3'-splice site recognition regulation of alternative mRNA splicing, via spliceosome U2-type prespliceosome U2 snRNP catalytic step 2 spliceosome translational initiation RNA transport translation initiation factor activity | details |
Expression profiles
 Show details about module gene expression profiling |