TissueCFM001721's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| lysosome organization | 0.007788082 | GO:0007040 |
| regulation of SNARE complex assembly | 0.007788082 | GO:0035542 |
| phosphatidylcholine catabolic process | 0.007788082 | GO:0034638 |
| endosome organization | 0.007788082 | GO:0007032 |
| vesicle docking involved in exocytosis | 0.012455409 | GO:0006904 |
| protein binding, bridging | 0.01353693 | GO:0030674 |
| phospholipase D activity | 0.01353693 | GO:0004630 |
| N-acylphosphatidylethanolamine-specific phospholipase D activity | 0.01353693 | GO:0070290 |
| choline biosynthesis III | 0.013613199 | plantCyc |
| phosphatidate metabolism, as a signaling molecule | 0.013613199 | plantCyc |
| phospholipases | 0.013613199 | plantCyc |
| lipid catabolic process | 0.020740617 | GO:0016042 |
| HOPS complex | 0.025735171 | GO:0030897 |
| poly(A) RNA binding | 0.02704387 | GO:0044822 |
| Autophagy - yeast | 0.030843246 | KEGG pathway |
| Glycerophospholipid metabolism | 0.030843246 | KEGG pathway |
| mRNA surveillance pathway | 0.030843246 | KEGG pathway |
| RNA degradation | 0.030843246 | KEGG pathway |
| Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase | 0.032109597 | kinase family |
| peptidyl-serine phosphorylation | 0.035566386 | GO:0018105 |
| RNA processing | 0.035566386 | GO:0006396 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001456 | AT4G03180 (1.00E-23) | |
| CRO_T003771 | AT2G05170 (0) | ATVPS11|vacuolar protein sorting 11 |
| CRO_T005322 | AT1G55180 (4.00E-92) | PLDEPSILON|phospholipase D alpha 4 |
| CRO_T005788 | AT2G35920 (0) | RNA helicase family protein |
| CRO_T014745 | AT4G15900 (9.00E-17) | PRL1|pleiotropic regulatory locus 1 |
| CRO_T033254 | AT5G62310 (0) | IRE|INCOMPLETE ROOT HAIR ELONGATION |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TissueCFM001776 | Alzheimer's disease Protein_kinases_phosphatases, PPC:4.2.6: IRE/NPH/PI dependent/S6 Kinase phosphatidylcholine catabolic process peptide catabolic process phospholipase D activity UFM1 hydrolase activity N-acylphosphatidylethanolamine-specific phospholipase D activity potassium ion transport choline biosynthesis III phosphatidate metabolism, as a signaling molecule phospholipases Glycerophospholipid metabolism lipid catabolic process protein processing peptidyl-serine phosphorylation proteolysis involved in cellular protein catabolic process metalloendopeptidase activity intracellular signal transduction | details |
Expression profiles
 Show details about module gene expression profiling |