TreatCFM000142's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| calcium-dependent cysteine-type endopeptidase activity | 0.004431642 | GO:0004198 |
| ion channel activity | 0.004431642 | GO:0005216 |
| Rho guanyl-nucleotide exchange factor activity | 0.00639795 | GO:0005089 |
| integral component of chloroplast outer membrane | 0.008096328 | GO:0031359 |
| Plant-pathogen interaction | 0.013402699 | KEGG pathway |
| cation transport | 0.015627901 | GO:0006812 |
| vesicle docking involved in exocytosis | 0.015627901 | GO:0006904 |
| chloroplast inner membrane | 0.016168745 | GO:0009706 |
| exocyst | 0.016168745 | GO:0000145 |
| Transcription_related, Transcription factor: M-type | 0.016681209 | TF family |
| Ubiquitin_Proteasome_system, DUB: OTU | 0.016681209 | ubs family |
| ion transmembrane transport | 0.027935932 | GO:0034220 |
| positive regulation of GTPase activity | 0.027935932 | GO:0043547 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001219 | AT3G56640 (0) | SEC15A|exocyst complex component sec15A |
| CRO_T006045 | AT3G57810 (1.00E-48) | Cysteine proteinases superfamily protein |
| CRO_T018836 | AT2G43950 (1.00E-68) | ATOEP37|ARABIDOPSIS CHLOROPLAST OUTER ENVELOPE PROTEIN 37; OEP37|chloroplast outer envelope protein 37 |
| CRO_T021326 | AT1G79860 (3.00E-169) | MEE64|MATERNAL EFFECT EMBRYO ARREST 64; ROPGEF12|ROP (rho of plants) guanine nucleotide exchange factor 12 |
| CRO_T025028 | AT1G77980 (1.00E-19) | AGL66|AGAMOUS-like 66 |
| CRO_T028227 | AT2G27480 (4.00E-57) | Calcium-binding EF-hand family protein |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000152 | baicalein degradation (hydrogen peroxide detoxification) wogonin metabolism Glycosaminoglycan degradation Vasopressin-regulated water reabsorption negative regulation of post-embryonic development negative regulation of reproductive process hydrolysis and/or rearrangement of glycosidic bonds, Glycoside Hydrolases: GHnc calcium-dependent cysteine-type endopeptidase activity Rho GDP-dissociation inhibitor activity benzoate biosynthesis I (CoA-dependent, β-oxidative) Transcription_related, Transcription factor: MIKC Plant-pathogen interaction Protein_kinases_phosphatases, PPC:1.2.2: Receptor Like Cytoplasmic Kinase VII | details |
| TreatCFM001486 | integral component of chloroplast outer membrane cation transport RNA secondary structure unwinding ER to Golgi vesicle-mediated transport ion transmembrane transport ion channel activity chloroplast inner membrane | details |
Expression profiles
 Show details about module gene expression profiling |