TreatCFM000407's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| formation of glycosidic bonds, GlycosylTransferases: GTnc | 0.006367434 | cazy family |
| polygalacturonate 4-alpha-galacturonosyltransferase activity | 0.010334386 | GO:0047262 |
| strictosidine synthase activity | 0.010334386 | GO:0016844 |
| homogalacturonan biosynthesis | 0.01168571 | plantCyc |
| secologanin and strictosidine biosynthesis | 0.014043769 | plantCyc |
| Amino sugar and nucleotide sugar metabolism | 0.014279181 | KEGG pathway |
| nucleotidyltransferase activity | 0.014735076 | GO:0016779 |
| amino acid binding | 0.014735076 | GO:0016597 |
| pectin biosynthetic process | 0.01919385 | GO:0045489 |
| biosynthetic process | 0.033141677 | GO:0009058 |
| Golgi membrane | 0.044979151 | GO:0000139 |
| endosome | 0.044979151 | GO:0005768 |
| membrane part | 0.044979151 | GO:0044425 |
| trans-Golgi network | 0.044979151 | GO:0005802 |
| vacuolar membrane | 0.044979151 | GO:0005774 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T000880 | AT1G08470 (1.00E-153) | SSL3|strictosidine synthase-like 3 |
| CRO_T004080 | AT1G76990 (1.00E-06) | ACR3|ACT domain repeat 3 |
| CRO_T019075 | AT5G07820 (2.00E-14) | Plant calmodulin-binding protein-related |
| CRO_T020340 | AT3G07680 (2.00E-36) | p24beta2|p24 subfamily beta 2 |
| CRO_T020915 | AT1G10720 (2.00E-38) | BSD domain-containing protein |
| CRO_T025542 | AT3G61130 (0) | GAUT1|galacturonosyltransferase 1 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000455 | homogalacturonan biosynthesis formation of glycosidic bonds, GlycosylTransferases: GTnc pectin biosynthetic process regulation of cyclin-dependent protein serine/threonine kinase activity polygalacturonate 4-alpha-galacturonosyltransferase activity protein kinase binding Amino sugar and nucleotide sugar metabolism nucleotidyltransferase activity amino acid binding Golgi membrane endosome membrane part trans-Golgi network vacuolar membrane | details |
| TreatCFM001772 | mitochondrial proton-transporting ATP synthase, catalytic core daphnetin modification regulation of barrier septum assembly mRNA modification adenosine ribonucleotides de novo biosynthesis chloroplast fission chloroplast ATPase binding ATP hydrolysis coupled proton transport cell division ATP synthesis coupled proton transport nucleic acid phosphodiester bond hydrolysis endonuclease activity proton-transporting ATP synthase activity, rotational mechanism identical protein binding formation of glycosidic bonds, GlycosylTransferases: GTnc Oxidative phosphorylation | details |
Expression profiles
 Show details about module gene expression profiling |