TreatCFM000464's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| Ubiquitin_Proteasome_system, DUB: USP | 0.005572906 | ubs family |
| developmental vegetative growth | 0.00608174 | GO:0080186 |
| 1,3-β-D-glucan biosynthesis | 0.009090633 | plantCyc |
| purine deoxyribonucleosides salvage | 0.009090633 | plantCyc |
| adenylate kinase activity | 0.010631727 | GO:0004017 |
| 1,3-beta-D-glucan synthase activity | 0.010631727 | GO:0003843 |
| carbon-sulfur lyase activity | 0.010631727 | GO:0016846 |
| thiol-dependent ubiquitinyl hydrolase activity | 0.010631727 | GO:0036459 |
| adenosine ribonucleotides de novo biosynthesis | 0.012480797 | plantCyc |
| nucleotide phosphorylation | 0.016197855 | GO:0046939 |
| (1->3)-beta-D-glucan biosynthetic process | 0.016197855 | GO:0006075 |
| protein deubiquitination | 0.016695155 | GO:0016579 |
| 1,3-beta-D-glucan synthase complex | 0.024108225 | GO:0000148 |
| Purine metabolism | 0.031027882 | KEGG pathway |
| ATPase activity | 0.03570142 | GO:0016887 |
| ubiquitin-dependent protein catabolic process | 0.039311166 | GO:0006511 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T006185 | AT5G16940 (7.00E-58) | carbon-sulfur lyases |
| CRO_T009818 | AT5G60340 (5.00E-60) | AAK6|Arabidopsis adenylate kinase 6; AK6|adenylate kinase 6 |
| CRO_T010860 | AT1G06490 (0) | ATGSL07|glucan synthase-like 7; CalS7|callose synthase 7 |
| CRO_T021961 | AT5G64816 (3.00E-58) | unknown protein |
| CRO_T030428 | AT3G22480 (1.00E-43) | PDF2|prefoldin 2 |
| CRO_T032407 | AT3G15700 (5.00E-16) | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
| CRO_T032538 | AT4G31670 (2.00E-10) | UBP18|ubiquitin-specific protease 18 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM001427 | NAD transporter activity intracellular NAD transport mitochondrial inner membrane presequence translocase complex Transcription_related, Transcription factor: PLATZ activation of GTPase activity regulation of vesicle fusion protein import into mitochondrial matrix Rab GTPase binding formation of glycosidic bonds, GlycosylTransferases: GTnc GTPase activator activity integral component of membrane endomembrane system | details |
| TreatCFM001796 | NAD transporter activity NAD transport U5 snRNP | details |
| TreatCFM002146 | Proteasome protochlorophyllide reductase activity transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly RNA polymerase II transcription factor activity, TBP-class protein binding, involved in preinitiation complex assembly Basal transcription factors phytosphingosine metabolic process proteasome complex proteasome core complex, alpha-subunit complex 1,3-beta-D-glucan synthase complex transcription factor TFIID complex Transcription_related, Transcription factor: ERF transcription regulatory region DNA binding threonine-type endopeptidase activity 1,3-beta-D-glucan synthase activity 1,3-β-D-glucan biosynthesis phosphatidate metabolism, as a signaling molecule positive regulation of transcription from RNA polymerase II promoter (1->3)-beta-D-glucan biosynthetic process macromolecule metabolic process response to cold very long chain fatty acid biosynthesis I very long chain fatty acid biosynthesis II chromatin binding primary metabolic process | details |
Expression profiles
 Show details about module gene expression profiling |