TreatCFM000505's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| putrescine biosynthesis II | 0.001063594 | plantCyc |
| N-carbamoylputrescine amidase activity | 0.001950499 | GO:0050126 |
| polyamine biosynthetic process | 0.005909729 | GO:0006596 |
| Arginine and proline metabolism | 0.015925644 | KEGG pathway |
| Endocytosis | 0.026405845 | KEGG pathway |
| ubiquitin-dependent protein catabolic process | 0.047800635 | GO:0006511 |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T004778 | AT2G27450 (1.00E-141) | NLP1|nitrilase-like protein 1 |
| CRO_T007096 | AT2G31130 (4.00E-21) | unknown protein |
| CRO_T009240 | AT5G54310 (2.00E-81) | AGD5|ARF-GAP domain 5; NEV|NEVERSHED |
| CRO_T016241 | AT5G20910 (3.00E-21) | AIP2|ABI3-interacting protein 2 |
| CRO_T022007 | AT4G37280 (4.00E-26) | MRG family protein |
| CRO_T031304 | AT1G09380 (2.00E-31) | UMAMIT25|Usually multiple acids move in and out Transporters 25 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000506 | putrescine biosynthesis II N-carbamoylputrescine amidase activity polyamine biosynthetic process SNAP receptor activity amino acid transmembrane transporter activity SNARE binding Arginine and proline metabolism vesicle fusion exocytosis amino acid transmembrane transport Endocytosis | details |
| TreatCFM000807 | adenosine ribonucleotides de novo biosynthesis Transcription_related, Transcription regulator: SET regulation of energy homeostasis myo-inositol:proton symporter activity adenylate kinase activity myo-inositol transport nucleotide phosphorylation cell wall organization or biogenesis glucose import glucose transmembrane transport glucose transmembrane transporter activity O-acetyltransferase activity sugar:proton symporter activity proton transport Purine metabolism | details |
Expression profiles
 Show details about module gene expression profiling |