TreatCFM000573's detailed annotation
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Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
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Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| drug transmembrane transport | 0.013984556 | GO:0006855 |
| Transcription_related, Transcription factor: HB | 0.015414579 | TF family |
| drug transmembrane transporter activity | 0.024513766 | GO:0015238 |
| lipid binding | 0.024513766 | GO:0008289 |
| antiporter activity | 0.024513766 | GO:0015297 |
| Purine metabolism | 0.031027882 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T010388 | AT4G21903 (9.00E-21) | MATE efflux family protein |
| CRO_T011669 | - | - |
| CRO_T014875 | - | - |
| CRO_T018804 | - | - |
| CRO_T022180 | - | - |
| CRO_T029369 | AT1G54250 (3.00E-36) | ATRPABC16.5; NRPB8A; NRPE8A|RNA polymerase Rpb8 |
| CRO_T031613 | - | - |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000572 | Homologous recombination ER to Golgi vesicle-mediated transport drug transmembrane transport drug transmembrane transporter activity antiporter activity | details |
| TreatCFM000611 | Protein_kinases_phosphatases, PPC:1.6.2: Plant External Response Like Kinase Purine metabolism formation of glycosidic bonds, GlycosylTransferases: GTnc | details |
| TreatCFM001003 | L-histidine biosynthesis L-serine transport protein metabolic process histidine biosynthetic process histidinol dehydrogenase activity L-serine transmembrane transporter activity chloroplast stroma protein processing protein histidine kinase binding protein-cysteine S-palmitoyltransferase activity phosphatidylinositol binding pollen development Biosynthesis of amino acids Endocytosis | details |
| TreatCFM001036 | N6-threonylcarbomyladenosine methylthiotransferase activity deadenylation-independent decapping of nuclear-transcribed mRNA deadenylation-dependent decapping of nuclear-transcribed mRNA tRNA methylthiolation positive regulation of catalytic activity enzyme activator activity formation of translation preinitiation complex protein polyubiquitination ribosome biogenesis regulation of translational initiation cytoplasmic mRNA processing body eukaryotic 48S preinitiation complex eukaryotic translation initiation factor 3 complex eukaryotic 43S preinitiation complex protein ubiquitination involved in ubiquitin-dependent protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process Ribosome biogenesis in eukaryotes RNA degradation mRNA binding RNA transport 4 iron, 4 sulfur cluster binding | details |
| TreatCFM001567 | protein-disulfide reductase (glutathione) activity 5-carbamoylmethyl uridine residue modification root meristem growth Elongator holoenzyme complex tRNA wobble uridine modification meristem structural organization Protein_kinases_phosphatases, PPC:1.7.2: Domain of Unknown Function 26 (DUF26) Kinase leaf development regulation of transcription from RNA polymerase II promoter calmodulin binding | details |
Expression profiles
 Show details about module gene expression profiling |