TreatCFM000603's detailed annotation
|
Protein: Yellow color--query protein Green color--interaction proteins. Interaction line: Pink--proteins own interaction and positive co-expression relationship with target protein Blue--proteins own interaction and negative co-expression relationship with target protein Orange--proteins own interaction and protein-protein relationship with target protein |
| This network produced by cytoscapeweb |
Module annotation (GSEA enrichment result)
| Function Annotation | FDR | Gene Ontolog |
|---|---|---|
| nucleic acid metabolic process | 0.003364814 | GO:0090304 |
| endonuclease activity | 0.004425424 | GO:0004519 |
| Fanconi anemia pathway | 0.013806304 | KEGG pathway |
| Transcription_related, Transcription factor: MYB | 0.016030198 | TF family |
| RNA transport | 0.040243127 | KEGG pathway |
Module member annotation
| Gene ID | Ortholog in Arabidopsis (Blast E-value) | Annotation in Arabidopsis |
|---|---|---|
| CRO_T001110 | AT3G55730 (5.00E-32) | AtMYB109|myb domain protein 109 |
| CRO_T002020 | AT3G20430 (2.00E-24) | |
| CRO_T007061 | - | - |
| CRO_T016035 | - | - |
| CRO_T028256 | AT2G30350 (5.00E-05) | Excinuclease ABC, C subunit, N-terminal |
| CRO_T029784 | AT1G28220 (2.00E-64) | ATPUP3|purine permease 3 |
Direct connection functional modules
| Module ID | Function Annotation | Overlap condition |
|---|---|---|
| TreatCFM000285 | Ubiquitin_Proteasome_system, DUB: JAMM precatalytic spliceosome proteasome complex response to salt stress proteasome-mediated ubiquitin-dependent protein catabolic process Proteasome Spliceosome | details |
| TreatCFM000843 | Ubiquitin_Proteasome_system, DUB: JAMM negative regulation of innate immune response petal formation negative regulation of cell proliferation mRNA polyadenylation leaf development proteasome complex mRNA surveillance pathway Proteasome polynucleotide adenylyltransferase activity proteasome-mediated ubiquitin-dependent protein catabolic process | details |
Expression profiles
 Show details about module gene expression profiling |